RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 PRDM12Q9H4Q4 367 aa5.45□□□□□ -1.54
SMNDC1-202ENST00000369603 GOLGA2P5Q9HBQ8 144 aa5.45□□□□□ -1.54
SMNDC1-202ENST00000369603 NMRK2Q9NPI5 230 aa5.45□□□□□ -1.54
SMNDC1-202ENST00000369603 GDAP2Q9NXN4 497 aa5.45□□□□□ -1.54
SMNDC1-202ENST00000369603 MARCH2Q9P0N8 246 aa5.45□□□□□ -1.54
SMNDC1-202ENST00000369603 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.45□□□□□ -1.54
SMNDC1-202ENST00000369603 PGAP2Q9UHJ9 254 aa5.45□□□□□ -1.54
SMNDC1-202ENST00000369603 GTF2IRD1Q9UHL9 959 aa5.45□□□□□ -1.54
SMNDC1-202ENST00000369603 G3BP2Q9UN86 482 aaKnown RBP5.45□□□□□ -1.54
SMNDC1-202ENST00000369603 CNTN6Q9UQ52 1028 aa5.45□□□□□ -1.54
SMNDC1-202ENST00000369603 ACOT9Q9Y305 439 aa5.45□□□□□ -1.54
SMNDC1-202ENST00000369603 NR2E1Q9Y466 385 aa5.45□□□□□ -1.54
SMNDC1-202ENST00000369603 PCDHB12Q9Y5F1 795 aa5.45□□□□□ -1.54
SMNDC1-202ENST00000369603 CCDC78A2IDD5 438 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 WDR27A2RRH5 827 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 HEATR9A2RTY3 570 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 CLDN5O00501 218 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 MAP3K7O43318 606 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 CNMDO75829 334 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 ATP6V1G2O95670 118 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 AMHP03971 560 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 ATP5BP06576 529 aaKnown RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 RHOCP08134 193 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 SERPINF2P08697 491 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 MBL2P11226 248 aaPredicted RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 MLNP12872 115 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 GFAPP14136 432 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 TYMPP19971 482 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 TPSB2P20231 275 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 MGAT1P26572 445 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 CDK7P50613 346 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 ZNF132P52740 706 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 NSUN2Q08J23 767 aaKnown RBP eCLIP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 TWF1Q12792 350 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 TPSAB1Q15661 275 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 KIF19Q2TAC6 998 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 KBTBD12Q3ZCT8 623 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 CCDC153Q494R4 210 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 DCAF12L1Q5VU92 463 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 KYAT3Q6YP21 454 aaKnown RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 TMEM110Q86TL2 294 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 CMASQ8NFW8 434 aaPredicted RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 CXorf38Q8TB03 319 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 SPPL2BQ8TCT7 592 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 TCP10LQ8TDR4 215 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 RSPH1Q8WYR4 309 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 MIEF2Q96C03 454 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 FAR2Q96K12 515 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 CSPG4P5Q96PW8 444 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 EBNA1BP2Q99848 306 aaKnown RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 SIKE1Q9BRV8 207 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 SLC4A5Q9BY07 1137 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 B3GNT5Q9BYG0 378 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 TRIM15Q9C019 465 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 ILKAPQ9H0C8 392 aaPredicted RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 RNF208Q9H0X6 261 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 PKP3Q9Y446 797 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 ADGRA2Q96PE1 1338 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 RBM47A0AV96 593 aaKnown RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 SLCO1B7G3V0H7 640 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 STX7O15400 261 aaKnown RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 PAPSS1O43252 624 aaPredicted RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 IRF1P10914 325 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 SELPP16109 830 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 ATN1P54259 1190 aaPredicted RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 SOWAHAQ2M3V2 549 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 C1orf146Q5VVC0 180 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 NUDT18Q6ZVK8 323 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 EFL1Q7Z2Z2 1120 aaKnown RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 PRUNE1Q86TP1 453 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 ACMSDQ8TDX5 336 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 PRCCQ92733 491 aaPredicted RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 NSL1Q96IY1 281 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 PGLYRP2Q96PD5 576 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 YME1L1Q96TA2 773 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 ADGRE3Q9BY15 652 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 DRC3Q9H069 523 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 NEUROG2Q9H2A3 272 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 C10orf88Q9H8K7 445 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 CYP4F11Q9HBI6 524 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 RXFP1Q9HBX9 757 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 NT5MQ9NPB1 228 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 IARS2Q9NSE4 1012 aaKnown RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 GRHL1Q9NZI5 618 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 SIX4Q9UIU6 781 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 ARL5CA6NH57 179 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 TRPC5OSA6NMA1 111 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 CFLARO15519 480 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 CSPG5O95196 566 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 RBP1P09455 135 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 CPA3P15088 417 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 OR1E1P30953 314 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 PGM1P36871 562 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 RGS4P49798 205 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 PURAQ00577 322 aaKnown RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 POLD3Q15054 466 aaPredicted RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 ANKRD20A4Q4UJ75 823 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 PABPC1LQ4VXU2 614 aaKnown RBP5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 UGT3A1Q6NUS8 523 aa5.44□□□□□ -1.54
SMNDC1-202ENST00000369603 SLC30A9Q6PML9 568 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms