RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 UNC45BQ8IWX7 931 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 FMR1NBQ8N0W7 255 aaPredicted RBP10.75□□□□□ -0.69
CLRN3-201ENST00000368671 SCML4Q8N228 414 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 PPM1KQ8N3J5 372 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 C1orf216Q8TAB5 229 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 RHBDD1Q8TEB9 315 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 GANCQ8TET4 914 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 SLC35F5Q8WV83 523 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 IRGQQ8WZA9 623 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 GOLGA1Q92805 767 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 KAT5Q92993 513 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 BIRC7Q96CA5 298 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 GSDMAQ96QA5 445 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 MTG2Q9H4K7 406 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 FBRSQ9HAH7 460 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 TM9SF3Q9HD45 589 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 SUN2Q9UH99 717 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 KIAA1257Q9ULG3 409 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.75□□□□□ -0.69
CLRN3-201ENST00000368671 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.75□□□□□ -0.69
CLRN3-201ENST00000368671 PLXNB3Q9ULL4 1909 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 PTPRBP23467 1997 aa10.75□□□□□ -0.69
CLRN3-201ENST00000368671 CNOT1A5YKK6 2376 aaKnown RBP10.75□□□□□ -0.69
CLRN3-201ENST00000368671 USP24Q9UPU5 2620 aa10.74□□□□□ -0.69
CLRN3-201ENST00000368671 TPRP12270 2363 aaKnown RBP10.74□□□□□ -0.69
CLRN3-201ENST00000368671 TYW5A2RUC4 315 aaKnown RBP10.74□□□□□ -0.69
CLRN3-201ENST00000368671 GOLGA6L4A6NEF3 574 aa10.74□□□□□ -0.69
CLRN3-201ENST00000368671 FAM47DPA6NHR8 397 aa10.74□□□□□ -0.69
CLRN3-201ENST00000368671 IGLV3-27P01718 113 aa10.74□□□□□ -0.69
CLRN3-201ENST00000368671 PAEPP09466 180 aa10.74□□□□□ -0.69
CLRN3-201ENST00000368671 GGCXP38435 758 aa10.74□□□□□ -0.69
CLRN3-201ENST00000368671 ST8SIA6P61647 398 aa10.74□□□□□ -0.69
CLRN3-201ENST00000368671 ZBTB16Q05516 673 aa10.74□□□□□ -0.69
CLRN3-201ENST00000368671 COL9A2Q14055 689 aaPredicted RBP10.74□□□□□ -0.69
CLRN3-201ENST00000368671 CNGA2Q16280 664 aa10.74□□□□□ -0.69
CLRN3-201ENST00000368671 KIF19Q2TAC6 998 aa10.74□□□□□ -0.69
CLRN3-201ENST00000368671 FAM133BQ5BKY9 247 aaKnown RBP10.74□□□□□ -0.69
CLRN3-201ENST00000368671 NUGGCQ68CJ6 796 aa10.74□□□□□ -0.69
CLRN3-201ENST00000368671 ZNF776Q68DI1 518 aaPredicted RBP10.74□□□□□ -0.69
CLRN3-201ENST00000368671 NADSYN1Q6IA69 706 aa10.74□□□□□ -0.69
CLRN3-201ENST00000368671 BRICD5Q6PL45 260 aa10.74□□□□□ -0.69
CLRN3-201ENST00000368671 C19orf48Q6RUI8 117 aa10.74□□□□□ -0.69
CLRN3-201ENST00000368671 LRSAM1Q6UWE0 723 aa10.74□□□□□ -0.69
CLRN3-201ENST00000368671 CCNI2Q6ZMN8 369 aaPredicted RBP10.74□□□□□ -0.69
CLRN3-201ENST00000368671 ADAT2Q7Z6V5 191 aaKnown RBP10.74□□□□□ -0.69
CLRN3-201ENST00000368671 CARNMT1Q8N4J0 409 aa10.74□□□□□ -0.69
CLRN3-201ENST00000368671 HJURPQ8NCD3 748 aaPredicted RBP10.74□□□□□ -0.69
CLRN3-201ENST00000368671 BAHD1Q8TBE0 780 aaPredicted RBP10.74□□□□□ -0.69
CLRN3-201ENST00000368671 PRICKLE1Q96MT3 831 aaPredicted RBP10.74□□□□□ -0.69
CLRN3-201ENST00000368671 SPSB2Q99619 263 aa10.74□□□□□ -0.69
CLRN3-201ENST00000368671 ZSWIM1Q9BR11 485 aa10.74□□□□□ -0.69
CLRN3-201ENST00000368671 CCDC86Q9H6F5 360 aaKnown RBP10.74□□□□□ -0.69
CLRN3-201ENST00000368671 METTL14Q9HCE5 456 aaKnown RBP10.74□□□□□ -0.69
CLRN3-201ENST00000368671 NCKAP1Q9Y2A7 1128 aa10.74□□□□□ -0.69
CLRN3-201ENST00000368671 BTBD3Q9Y2F9 522 aa10.74□□□□□ -0.69
CLRN3-201ENST00000368671 ANKRD6Q9Y2G4 727 aa10.74□□□□□ -0.69
CLRN3-201ENST00000368671 PSMA7O14818 248 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 IRAK2O43187 625 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 SIN3BO75182 1162 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 MOCS2O96007 188 aaPredicted RBP10.73□□□□□ -0.69
CLRN3-201ENST00000368671 CAPNS1P04632 268 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 ATXN1LP0C7T5 689 aaKnown RBP10.73□□□□□ -0.69
CLRN3-201ENST00000368671 CD27P26842 260 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 GRIA4P48058 902 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 RPS24P62847 133 aaKnown RBP10.73□□□□□ -0.69
CLRN3-201ENST00000368671 IL9RQ01113 521 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 STIM1Q13586 685 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 SUZ12Q15022 739 aaKnown RBP10.73□□□□□ -0.69
CLRN3-201ENST00000368671 STILQ15468 1287 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 CCDC157Q569K6 752 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 MPP7Q5T2T1 576 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 KIAA0895LQ68EN5 471 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 KLHL10Q6JEL2 608 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 RRAGAQ7L523 313 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 ARHGEF19Q8IW93 802 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 CCDC117Q8IWD4 279 aaPredicted RBP10.73□□□□□ -0.69
CLRN3-201ENST00000368671 DHX40Q8IX18 779 aaKnown RBP10.73□□□□□ -0.69
CLRN3-201ENST00000368671 CFAP52Q8N1V2 620 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 ZNF557Q8N988 423 aaPredicted RBP10.73□□□□□ -0.69
CLRN3-201ENST00000368671 MDM1Q8TC05 714 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 ADAM32Q8TC27 787 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 DQX1Q8TE96 717 aaKnown RBP10.73□□□□□ -0.69
CLRN3-201ENST00000368671 FAM149B1Q96BN6 582 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 MYEOVQ96EZ4 313 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 FCRL2Q96LA5 508 aaPredicted RBP10.73□□□□□ -0.69
CLRN3-201ENST00000368671 CDC6Q99741 560 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 DDX50Q9BQ39 737 aaKnown RBP10.73□□□□□ -0.69
CLRN3-201ENST00000368671 SGK2Q9HBY8 427 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 OSGEPQ9NPF4 335 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 ST7Q9NRC1 585 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 TOR4AQ9NXH8 423 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 KIAA1522Q9P206 1035 aaPredicted RBP10.73□□□□□ -0.69
CLRN3-201ENST00000368671 NAALADL1Q9UQQ1 740 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 PCDHGB2Q9Y5G2 931 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 PCNX2A6NKB5 2137 aa10.73□□□□□ -0.69
CLRN3-201ENST00000368671 ADAMTS20P59510 1910 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 H0Y8X5 98 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 FBXO21O94952 628 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 S1PR4O95977 384 aa10.72□□□□□ -0.69
CLRN3-201ENST00000368671 ASLP04424 464 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms