RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 PACSIN2Q9UNF0 486 aaPredicted RBP9.16□□□□□ -0.94
TPM3-213ENST00000368545 SPTBN5Q9NRC6 3674 aaKnown RBP9.16□□□□□ -0.94
TPM3-213ENST00000368545 KCNK3O14649 394 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 HUS1O60921 280 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 EOMESO95936 686 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 CXCR5P32302 372 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 SLC1A1P43005 524 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 LILRA4P59901 499 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 PTP4A2Q12974 167 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 GRIK3Q13003 919 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 AUHQ13825 339 aaKnown RBP9.15□□□□□ -0.94
TPM3-213ENST00000368545 SUZ12Q15022 739 aaKnown RBP9.15□□□□□ -0.94
TPM3-213ENST00000368545 ELF2Q15723 593 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 SOWAHAQ2M3V2 549 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 ERCC6LQ2NKX8 1250 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 TEX35Q5T0J7 233 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 PLEKHA7Q6IQ23 1121 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 CXorf57Q6NSI4 855 aaKnown RBP9.15□□□□□ -0.94
TPM3-213ENST00000368545 MMS22LQ6ZRQ5 1243 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 LRRC8DQ7L1W4 858 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 LIMS2Q7Z4I7 341 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 ECHDC2Q86YB7 292 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 CRIPAKQ8N1N5 446 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 MSLNLQ96KJ4 702 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 TWNKQ96RR1 684 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 GAD1Q99259 594 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 CARD9Q9H257 536 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 GOLPH3Q9H4A6 298 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 RAD18Q9NS91 495 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 SORCS3Q9UPU3 1222 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 ALG6Q9Y672 507 aa9.15□□□□□ -0.94
TPM3-213ENST00000368545 TSC2P49815 1807 aa9.15□□□□□ -0.95
TPM3-213ENST00000368545 CCDC66A2RUB6 948 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 M0QYV0 167 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 MYO1FO00160 1098 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 O00370 1275 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 ZNF185O15231 689 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 INPPL1O15357 1258 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 MAP4K2Q12851 820 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 MESDQ14696 234 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 IL31Q6EBC2 164 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 CCDC70Q6NSX1 233 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 LCLAT1Q6UWP7 414 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 SLC24A5Q71RS6 500 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 ERICH1Q86X53 443 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 C3orf20Q8ND61 904 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 OR6B3Q8NGW1 331 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 ACTRT1Q8TDG2 376 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 LPPQ93052 612 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 TNIP3Q96KP6 325 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 UROC1Q96N76 676 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 PSMB7Q99436 277 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 SNX25Q9H3E2 840 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 GOLGA2P5Q9HBQ8 144 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 CRIM1Q9NZV1 1036 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 SAMD15Q9P1V8 674 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 WDR35Q9P2L0 1181 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.14□□□□□ -0.95
TPM3-213ENST00000368545 V9GYY5 206 aaPredicted RBP9.14□□□□□ -0.95
TPM3-213ENST00000368545 PODXLO00592 558 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 SPOPO43791 374 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 ARHGEF15O94989 841 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 TUBBP07437 444 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 SETSIPP0DME0 302 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 MYBL2P10244 700 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 WARSP23381 471 aaKnown RBP9.14□□□□□ -0.95
TPM3-213ENST00000368545 LTBRP36941 435 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 SCNN1GP51170 649 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 SNX16P57768 344 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 MAMLD1Q13495 774 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 ARHGAP17Q68EM7 881 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 DENND1BQ6P3S1 775 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 DNAJC24Q6P3W2 148 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 C20orf204Q6ZNR8 217 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 ADGRF2Q8IZF7 708 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 TMEM86AQ8N2M4 240 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 RASGEF1CQ8N431 466 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 KLHL23Q8NBE8 558 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 SPATA18Q8TC71 538 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 IPO4Q8TEX9 1081 aaKnown RBP9.14□□□□□ -0.95
TPM3-213ENST00000368545 USP33Q8TEY7 942 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 ANKRD7Q92527 254 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 APBB2Q92870 758 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 NECTIN4Q96NY8 510 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 NAP1L3Q99457 506 aaPredicted RBP9.14□□□□□ -0.95
TPM3-213ENST00000368545 MRPL45Q9BRJ2 306 aaKnown RBP9.14□□□□□ -0.95
TPM3-213ENST00000368545 ORAI3Q9BRQ5 295 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 HESX1Q9UBX0 185 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 TAGLN3Q9UI15 199 aa9.14□□□□□ -0.95
TPM3-213ENST00000368545 FAM170AA1A519 330 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 ARHGEF37A1IGU5 675 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 A8MXQ7 604 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 PGRMC1O00264 195 aaKnown RBP9.13□□□□□ -0.95
TPM3-213ENST00000368545 MX2P20592 715 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 COMTP21964 271 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 CTNNA2P26232 953 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 MAN1A1P33908 653 aa9.13□□□□□ -0.95
TPM3-213ENST00000368545 CTNNA1P35221 906 aaKnown RBP9.13□□□□□ -0.95
TPM3-213ENST00000368545 GNL1P36915 607 aaPredicted RBP9.13□□□□□ -0.95
TPM3-213ENST00000368545 DGKGP49619 791 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms