RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 MATR3P43243 847 aaKnown RBP eCLIP6.81□□□□□ -1.328e-7■■■■■ 31.9
ECHDC1-202ENST00000368289 CARSP49589 748 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 GYS2P54840 703 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 PTENP60484 403 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 RPS6P62753 249 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 BFSP1Q12934 665 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 BYSLQ13895 437 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 SIM2Q14190 667 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 SLMAPQ14BN4 828 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 DCAF17Q5H9S7 520 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 TCERG1LQ5VWI1 586 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 PCSK4Q6UW60 755 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 SEPT14Q6ZU15 432 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 CCDC149Q6ZUS6 474 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 ZNF605Q86T29 641 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 DAAM2Q86T65 1068 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 TADA2BQ86TJ2 420 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 TP53INP2Q8IXH6 220 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 THNSL1Q8IYQ7 743 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 METTL13Q8N6R0 699 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 PPTC7Q8NI37 304 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 HDAC7Q8WUI4 952 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 CCDC120Q96HB5 630 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 CCDC43Q96MW1 224 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 ACCSQ96QU6 501 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 MXRA8Q9BRK3 442 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 SYT11Q9BT88 431 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 TMEM109Q9BVC6 243 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 FAM126AQ9BYI3 521 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 OSBPL6Q9BZF3 934 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 ROPN1BQ9BZX4 212 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 KLHL25Q9H0H3 589 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 ARRDC1-AS1Q9H2J1 176 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 ACTR5Q9H9F9 607 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 ROPN1Q9HAT0 212 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 ATP13A1Q9HD20 1204 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 LTB4R2Q9NPC1 389 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 ENTPD7Q9NQZ7 604 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 AGPAT3Q9NRZ7 376 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 HOMER3Q9NSC5 361 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 C2orf42Q9NWW7 574 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 GFOD1Q9NXC2 390 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 UVRAGQ9P2Y5 699 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 MTRF1LQ9UGC7 380 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 PCYOX1Q9UHG3 505 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 DNAJC12Q9UKB3 198 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 NFU1Q9UMS0 254 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 CTDP1Q9Y5B0 961 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 GREB1Q4ZG55 1949 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 FNDC1Q4ZHG4 1894 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 MTORP42345 2549 aa6.81□□□□□ -1.32
ECHDC1-202ENST00000368289 OTOGQ6ZRI0 2925 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 CELSR2Q9HCU4 2923 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 SHISA3A0PJX4 238 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 ARHGEF35A5YM69 484 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 EIF4E1BA6NMX2 242 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 AGRPO00253 132 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 NOP56O00567 594 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 DDX3XO00571 662 aaKnown RBP eCLIP6.8□□□□□ -1.327e-10■■■□□ 16
ECHDC1-202ENST00000368289 NDUFAB1O14561 156 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 SHOXO15266 292 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 RAD51CO43502 376 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 EXOC3O60645 756 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 PPFIA2O75334 1257 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 FTCDO95954 541 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 EPHX1P07099 455 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 NUDT17P0C025 328 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 ATP5DP30049 168 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 CTNNA1P35221 906 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 HSD17B4P51659 736 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 JAK3P52333 1124 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 GALCP54803 685 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 MFAP3P55082 362 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 PCBP3P57721 371 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 BPIFB4P59827 614 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 GTF2BQ00403 316 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 MYL7Q01449 175 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 SP2Q02086 613 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 CAV1Q03135 178 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 SCAPQ12770 1279 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 ITGB3BPQ13352 177 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 HLTFQ14527 1009 aaKnown RBP eCLIP6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 DRAP1Q14919 205 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 UBXN2BQ14CS0 331 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 GAB4Q2WGN9 574 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 TTC31Q49AM3 519 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 SLC44A4Q53GD3 710 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 ODR4Q5SWX8 454 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 POMZP3Q6PJE2 187 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 RNF111Q6ZNA4 994 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 ZNF677Q86XU0 584 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 CCDC50Q8IVM0 306 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 TPH2Q8IWU9 490 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 C4orf19Q8IY42 314 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 SYCP3Q8IZU3 236 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 CELF2-AS1Q8N7Q2 184 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 ZNF513Q8N8E2 541 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 SLC35G2Q8TBE7 412 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 CASKIN2Q8WXE0 1202 aa6.8□□□□□ -1.32
ECHDC1-202ENST00000368289 IFT81Q8WYA0 676 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms