RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 FAM170AA1A519 330 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 SPECC1L-ADORA2AF8WAN1 911 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 HGSO14964 777 aaPredicted RBP11.87□□□□□ -0.51
USF1-201ENST00000368019 MCF2LO15068 1137 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 MED7O43513 233 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 KRT36O76013 467 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 KRT37O76014 449 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 PDHA1P08559 390 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 SNRPAP09012 282 aaKnown RBP11.87□□□□□ -0.51
USF1-201ENST00000368019 MYL4P12829 197 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 ETS1P14921 441 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 HOXB8P17481 243 aaPredicted RBP11.87□□□□□ -0.51
USF1-201ENST00000368019 KDELR1P24390 212 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 CNTFP26441 200 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 PGM1P36871 562 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 PBX3P40426 434 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 SERPINB9P50453 376 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 ACTR3P61158 418 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 AP2B1P63010 937 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 PRKCEQ02156 737 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 OGDHQ02218 1023 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 WASHC5Q12768 1159 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 NCOA4Q13772 614 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 KCNJ11Q14654 390 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 ATP13A4Q4VNC1 1196 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 FNBP1LQ5T0N5 605 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 ZFYVE27Q5T4F4 411 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 LLGL2Q6P1M3 1020 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 RINLQ6ZS11 566 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 ARCQ7LC44 396 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 SLC26A11Q86WA9 606 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 SLC39A11Q8N1S5 342 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 FBXL6Q8N531 539 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 PDCD7Q8N8D1 485 aaKnown RBP11.87□□□□□ -0.51
USF1-201ENST00000368019 MRPL43Q8N983 215 aaKnown RBP11.87□□□□□ -0.51
USF1-201ENST00000368019 CMASQ8NFW8 434 aaPredicted RBP11.87□□□□□ -0.51
USF1-201ENST00000368019 PTPRN2Q92932 1015 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 AZIN2Q96A70 460 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 RTP4Q96DX8 246 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 ZNF668Q96K58 619 aaPredicted RBP11.87□□□□□ -0.51
USF1-201ENST00000368019 PHOX2BQ99453 314 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 FAM118BQ9BPY3 351 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 WDR83Q9BRX9 315 aaKnown RBP11.87□□□□□ -0.51
USF1-201ENST00000368019 TMEM121Q9BTD3 319 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 KIFC3Q9BVG8 833 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 NIFKQ9BYG3 293 aaKnown RBP11.87□□□□□ -0.51
USF1-201ENST00000368019 NIF3L1Q9GZT8 377 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 FAM124BQ9H5Z6 455 aaPredicted RBP11.87□□□□□ -0.51
USF1-201ENST00000368019 DHX33Q9H6R0 707 aaKnown RBP11.87□□□□□ -0.51
USF1-201ENST00000368019 ENTPD7Q9NQZ7 604 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 ARHGEF4Q9NR80 690 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 SIRPGQ9P1W8 387 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 PAK5Q9P286 719 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 PLA2G4CQ9UP65 541 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 C2CD2Q9Y426 696 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 NUB1Q9Y5A7 615 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 NUMBLQ9Y6R0 609 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 CFAP54Q96N23 3096 aa11.87□□□□□ -0.51
USF1-201ENST00000368019 EME2A4GXA9 379 aaPredicted RBP11.86□□□□□ -0.51
USF1-201ENST00000368019 C2orf71A6NGG8 1288 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 ENO4A6NNW6 628 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 ZNF487B1APH4 448 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 COPEO14579 308 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 TMEM63AO94886 807 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 RTN3O95197 1032 aaPredicted RBP11.86□□□□□ -0.51
USF1-201ENST00000368019 IFNB1P01574 187 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 C1QAP02745 245 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 SERPINA6P08185 405 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 SRGAP2BP0DMP2 458 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 MYL2P10916 166 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 PRKCHP24723 683 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 CDC25CP30307 473 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 ARL2P36404 184 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 TUBP50607 506 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 CACNA2D1P54289 1103 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 IRX4P78413 519 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 TCF15Q12870 199 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 TFDP2Q14188 446 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 EFTUD2Q15029 972 aaKnown RBP eCLIP11.86□□□□□ -0.513e-6■■■■□ 23.5
USF1-201ENST00000368019 NOMO1Q15155 1222 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 ANKRD22Q5VYY1 191 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 TIFABQ6ZNK6 161 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 CYS1Q717R9 158 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 TMC7Q7Z402 723 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 PHLDB2Q86SQ0 1253 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 SDCCAG8Q86SQ7 713 aaPredicted RBP11.86□□□□□ -0.51
USF1-201ENST00000368019 LRRC6Q86X45 466 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 ANKMY2Q8IV38 441 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 PASD1Q8IV76 773 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 SCUBE1Q8IWY4 988 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 ABI1Q8IZP0 508 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 SLC4A11Q8NBS3 891 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 JADE3Q92613 823 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 PRRX2Q99811 253 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 TRIM4Q9C037 500 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 IQCGQ9H095 443 aaKnown RBP11.86□□□□□ -0.51
USF1-201ENST00000368019 EPB41L1Q9H4G0 881 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 VCX3AQ9NNX9 186 aa11.86□□□□□ -0.51
USF1-201ENST00000368019 DMAP1Q9NPF5 467 aaPredicted RBP11.86□□□□□ -0.51
USF1-201ENST00000368019 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms