RNA–Protein interactions for RNA: ENST00000367893.4

LMX1A-203, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1A, Length 1,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-203ENST00000367893 ZRANB2O95218 330 aaKnown RBP eCLIP13.13□□□□□ -0.31
LMX1A-203ENST00000367893 KDELR1P24390 212 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 IL4RP24394 825 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 VIPR2P41587 438 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 HARS2P49590 506 aaKnown RBP13.13□□□□□ -0.31
LMX1A-203ENST00000367893 ZNF135P52742 658 aaPredicted RBP13.13□□□□□ -0.31
LMX1A-203ENST00000367893 MLLT6P55198 1093 aaPredicted RBP13.13□□□□□ -0.31
LMX1A-203ENST00000367893 COPS2P61201 443 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 USP4Q13107 963 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 PDK2Q15119 407 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 ZNF77Q15935 545 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 EFHC2Q5JST6 749 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 PIK3R6Q5UE93 754 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 MANEALQ5VSG8 457 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 FAM217AQ8IXS0 508 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 RCOR2Q8IZ40 523 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 ZSCAN18Q8TBC5 510 aaPredicted RBP13.13□□□□□ -0.31
LMX1A-203ENST00000367893 OSBPL9Q96SU4 736 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 PRMT1Q99873 361 aaKnown RBP13.13□□□□□ -0.31
LMX1A-203ENST00000367893 MAGEB5Q9BZ81 275 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 DCLK3Q9C098 648 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 SEMA4AQ9H3S1 761 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 SLITRK6Q9H5Y7 841 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 KIF9Q9HAQ2 790 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 TRPV5Q9NQA5 729 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.13□□□□□ -0.31
LMX1A-203ENST00000367893 GPATCH2LQ9NWQ4 482 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 RCOR3Q9P2K3 495 aaPredicted RBP13.13□□□□□ -0.31
LMX1A-203ENST00000367893 SLC12A6Q9UHW9 1150 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 XPO7Q9UIA9 1087 aaKnown RBP13.13□□□□□ -0.31
LMX1A-203ENST00000367893 CCL26Q9Y258 94 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 ZNF510Q9Y2H8 683 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 SPTBN4Q9H254 2564 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 EP300Q09472 2414 aaPredicted RBP13.13□□□□□ -0.31
LMX1A-203ENST00000367893 E2F8A0AVK6 867 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 LEFTY2O00292 366 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 GFRA2O00451 464 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 KCNK3O14649 394 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 ACSL4O60488 711 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 PRAMEF12O95522 483 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 HMBSP08397 361 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 PYGMP11217 842 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 PSMC3P17980 439 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 TCP1P17987 556 aaKnown RBP13.13□□□□□ -0.31
LMX1A-203ENST00000367893 CORO1AP31146 461 aaKnown RBP13.13□□□□□ -0.31
LMX1A-203ENST00000367893 HTR7P34969 479 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 PTPN7P35236 360 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 MAGEA9P43362 315 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 RPS9P46781 194 aaKnown RBP13.13□□□□□ -0.31
LMX1A-203ENST00000367893 HCAR3P49019 387 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 DPYSL3Q14195 570 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 C5orf22Q49AR2 442 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 MS4A13Q5J8X5 152 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 NADSYN1Q6IA69 706 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 ZNF683Q8IZ20 524 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 PYROXD2Q8N2H3 581 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 RASGEF1CQ8N431 466 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 KIF18AQ8NI77 898 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 RIN3Q8TB24 985 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 SH3RF2Q8TEC5 729 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 HSPH1Q92598 858 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 FAF2Q96CS3 445 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 RBM41Q96IZ5 413 aaKnown RBP13.13□□□□□ -0.31
LMX1A-203ENST00000367893 PBKQ96KB5 322 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 LRRC3BQ96PB8 259 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 KCTD15Q96SI1 283 aaPredicted RBP13.13□□□□□ -0.31
LMX1A-203ENST00000367893 ZNF670Q9BS34 389 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 TRMT61BQ9BVS5 477 aaKnown RBP13.13□□□□□ -0.31
LMX1A-203ENST00000367893 DHX35Q9H5Z1 703 aaKnown RBP13.13□□□□□ -0.31
LMX1A-203ENST00000367893 PCDH18Q9HCL0 1135 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 OBP2AQ9NY56 170 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 OR12D3Q9UGF7 316 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 AGO1Q9UL18 857 aaKnown RBP13.13□□□□□ -0.31
LMX1A-203ENST00000367893 TTC7AQ9ULT0 858 aaPredicted RBP13.13□□□□□ -0.31
LMX1A-203ENST00000367893 EFR3BQ9Y2G0 817 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 HS3ST4Q9Y661 456 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 SAR1BQ9Y6B6 198 aa13.13□□□□□ -0.31
LMX1A-203ENST00000367893 IGLV3-10A0A075B6K4 115 aa13.12□□□□□ -0.31
LMX1A-203ENST00000367893 FAM72CH0Y354 149 aa13.12□□□□□ -0.31
LMX1A-203ENST00000367893 LMNAP02545 664 aaKnown RBP13.12□□□□□ -0.31
LMX1A-203ENST00000367893 KRT1P04264 644 aa13.12□□□□□ -0.31
LMX1A-203ENST00000367893 CD48P09326 243 aa13.12□□□□□ -0.31
LMX1A-203ENST00000367893 GDI1P31150 447 aa13.12□□□□□ -0.31
LMX1A-203ENST00000367893 HOXC13P31276 330 aa13.12□□□□□ -0.31
LMX1A-203ENST00000367893 GJC1P36383 396 aa13.12□□□□□ -0.31
LMX1A-203ENST00000367893 CDKN2BP42772 138 aa13.12□□□□□ -0.31
LMX1A-203ENST00000367893 SLC11A2P49281 568 aa13.12□□□□□ -0.31
LMX1A-203ENST00000367893 CDH6P55285 790 aa13.12□□□□□ -0.31
LMX1A-203ENST00000367893 PPP2R5EQ16537 467 aa13.12□□□□□ -0.31
LMX1A-203ENST00000367893 ZNF528Q3MIS6 628 aa13.12□□□□□ -0.31
LMX1A-203ENST00000367893 FAM133BQ5BKY9 247 aaKnown RBP13.12□□□□□ -0.31
LMX1A-203ENST00000367893 ADGRF1Q5T601 910 aa13.12□□□□□ -0.31
LMX1A-203ENST00000367893 FAM72AQ5TYM5 149 aa13.12□□□□□ -0.31
LMX1A-203ENST00000367893 FAM72DQ6L9T8 149 aa13.12□□□□□ -0.31
LMX1A-203ENST00000367893 MFSD7Q6UXD7 560 aa13.12□□□□□ -0.31
LMX1A-203ENST00000367893 ZNF852Q6ZMS4 543 aa13.12□□□□□ -0.31
LMX1A-203ENST00000367893 SPOCD1Q6ZMY3 1216 aa13.12□□□□□ -0.31
LMX1A-203ENST00000367893 ANKS1BQ7Z6G8 1248 aa13.12□□□□□ -0.31
LMX1A-203ENST00000367893 FAM72BQ86X60 149 aa13.12□□□□□ -0.31
LMX1A-203ENST00000367893 DENND1CQ8IV53 801 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms