RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 NEU3Q9UQ49 428 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 CLUHO75153 1309 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 SLC12A8A0AV02 714 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 E9PAM4 449 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 FGF10O15520 208 aaPredicted RBP15.4■□□□□ 0.06
NEK2-201ENST00000366998 AVILO75366 819 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 SEC24AO95486 1093 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 CAPN2P17655 700 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 TPSB2P20231 275 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 GARSP41250 739 aaKnown RBP15.4■□□□□ 0.06
NEK2-201ENST00000366998 ELK3P41970 407 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 IFI35P80217 286 aaPredicted RBP15.4■□□□□ 0.06
NEK2-201ENST00000366998 PPARDQ03181 441 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 PPIDQ08752 370 aaKnown RBP15.4■□□□□ 0.06
NEK2-201ENST00000366998 GALNT2Q10471 571 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 WASHC5Q12768 1159 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 SEMA5AQ13591 1074 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 TRIP4Q15650 581 aaPredicted RBP15.4■□□□□ 0.06
NEK2-201ENST00000366998 TPSAB1Q15661 275 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 MANEALQ5VSG8 457 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 TTC19Q6DKK2 380 aaPredicted RBP15.4■□□□□ 0.06
NEK2-201ENST00000366998 ZNF567Q8N184 647 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 ATP6V0D2Q8N8Y2 350 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 AUTS2Q8WXX7 1259 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 HDAC11Q96DB2 347 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 TTLL2Q9BWV7 592 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 BRD8Q9H0E9 1235 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 CCSER2Q9H7U1 834 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 CYP4F11Q9HBI6 524 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 KLHL8Q9P2G9 620 aaPredicted RBP15.4■□□□□ 0.06
NEK2-201ENST00000366998 CTNNAL1Q9UBT7 734 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 SLC12A6Q9UHW9 1150 aa15.4■□□□□ 0.06
NEK2-201ENST00000366998 POC1B-GALNT4F8VUJ3 575 aa15.39■□□□□ 0.05
NEK2-201ENST00000366998 DFFAO00273 331 aa15.39■□□□□ 0.05
NEK2-201ENST00000366998 TLR5O60602 858 aa15.39■□□□□ 0.05
NEK2-201ENST00000366998 TCEA3O75764 348 aa15.39■□□□□ 0.05
NEK2-201ENST00000366998 HSPA1AP0DMV8 641 aaKnown RBP15.39■□□□□ 0.05
NEK2-201ENST00000366998 HSPA1BP0DMV9 641 aaKnown RBP15.39■□□□□ 0.05
NEK2-201ENST00000366998 ATP2A2P16615 1042 aaKnown RBP15.39■□□□□ 0.05
NEK2-201ENST00000366998 SSTR1P30872 391 aa15.39■□□□□ 0.05
NEK2-201ENST00000366998 HOXC13P31276 330 aa15.39■□□□□ 0.05
NEK2-201ENST00000366998 CA8P35219 290 aa15.39■□□□□ 0.05
NEK2-201ENST00000366998 TUBP50607 506 aa15.39■□□□□ 0.05
NEK2-201ENST00000366998 GPX6P59796 221 aa15.39■□□□□ 0.05
NEK2-201ENST00000366998 COG7P83436 770 aa15.39■□□□□ 0.05
NEK2-201ENST00000366998 CCDC38Q502W7 563 aa15.39■□□□□ 0.05
NEK2-201ENST00000366998 PIK3R6Q5UE93 754 aa15.39■□□□□ 0.05
NEK2-201ENST00000366998 TPGS2Q68CL5 300 aa15.39■□□□□ 0.05
NEK2-201ENST00000366998 PID1Q7Z2X4 250 aa15.39■□□□□ 0.05
NEK2-201ENST00000366998 C14orf80Q86SX3 495 aa15.39■□□□□ 0.05
NEK2-201ENST00000366998 DDX53Q86TM3 631 aaKnown RBP15.39■□□□□ 0.05
NEK2-201ENST00000366998 ZNF461Q8TAF7 563 aa15.39■□□□□ 0.05
NEK2-201ENST00000366998 ZNF512Q96ME7 567 aaPredicted RBP15.39■□□□□ 0.05
NEK2-201ENST00000366998 WDR83Q9BRX9 315 aaKnown RBP15.39■□□□□ 0.05
NEK2-201ENST00000366998 UBE2OQ9C0C9 1292 aaKnown RBP15.39■□□□□ 0.05
NEK2-201ENST00000366998 TBK1Q9UHD2 729 aa15.39■□□□□ 0.05
NEK2-201ENST00000366998 ZMYND8Q9ULU4 1186 aaPredicted RBP15.39■□□□□ 0.05
NEK2-201ENST00000366998 CARNS1A5YM72 827 aa15.38■□□□□ 0.05
NEK2-201ENST00000366998 PTPN3P26045 913 aa15.38■□□□□ 0.05
NEK2-201ENST00000366998 PSMB4P28070 264 aa15.38■□□□□ 0.05
NEK2-201ENST00000366998 ATP5DP30049 168 aa15.38■□□□□ 0.05
NEK2-201ENST00000366998 MLLT6P55198 1093 aaPredicted RBP15.38■□□□□ 0.05
NEK2-201ENST00000366998 GNGT1P63211 74 aa15.38■□□□□ 0.05
NEK2-201ENST00000366998 TAF12Q16514 161 aa15.38■□□□□ 0.05
NEK2-201ENST00000366998 ZNF771Q7L3S4 317 aaPredicted RBP15.38■□□□□ 0.05
NEK2-201ENST00000366998 MCUQ8NE86 351 aa15.38■□□□□ 0.05
NEK2-201ENST00000366998 CEP295NLQ96MC4 621 aa15.38■□□□□ 0.05
NEK2-201ENST00000366998 SELENOSQ9BQE4 189 aa15.38■□□□□ 0.05
NEK2-201ENST00000366998 PRKAG2Q9UGJ0 569 aa15.38■□□□□ 0.05
NEK2-201ENST00000366998 VANGL2Q9ULK5 521 aa15.38■□□□□ 0.05
NEK2-201ENST00000366998 DOCK4Q8N1I0 1966 aa15.38■□□□□ 0.05
NEK2-201ENST00000366998 MTSS1O43312 755 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 CDH16O75309 829 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 ABLIM3O94929 683 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 ZDHHC11BP0C7U3 371 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 PPM1AP35813 382 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 ALDH1A3P47895 512 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 SARNPP82979 210 aaKnown RBP15.37■□□□□ 0.05
NEK2-201ENST00000366998 NRG1Q02297 640 aaPredicted RBP15.37■□□□□ 0.05
NEK2-201ENST00000366998 TMED2Q15363 201 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 EMC10Q5UCC4 262 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 C3orf62Q6ZUJ4 267 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 CAND1Q86VP6 1230 aaKnown RBP15.37■□□□□ 0.05
NEK2-201ENST00000366998 IGDCC3Q8IVU1 814 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 ATPAF2Q8N5M1 289 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 PDZD8Q8NEN9 1154 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 MRRFQ96E11 262 aaKnown RBP15.37■□□□□ 0.05
NEK2-201ENST00000366998 CFAP36Q96G28 342 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 BTN2A3PQ96KV6 586 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 C1orf74Q96LT6 269 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 NACA2Q9H009 215 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 MPP6Q9NZW5 540 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 YIPF1Q9Y548 306 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 PCDHB12Q9Y5F1 795 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 TEX264Q9Y6I9 313 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 NYNRINQ9P2P1 1898 aaKnown RBP15.37■□□□□ 0.05
NEK2-201ENST00000366998 PRRG1O14668 218 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 FGBP02675 491 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 CSH1P0DML2 217 aa15.37■□□□□ 0.05
NEK2-201ENST00000366998 CSH2P0DML3 217 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms