RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 MRPS5P82675 430 aaKnown RBP15.13■□□□□ 0.01
PRKN-204ENST00000366896 BST1Q10588 318 aa15.13■□□□□ 0.01
PRKN-204ENST00000366896 MED21Q13503 144 aa15.13■□□□□ 0.01
PRKN-204ENST00000366896 TPSAB1Q15661 275 aa15.13■□□□□ 0.01
PRKN-204ENST00000366896 SCYL2Q6P3W7 929 aa15.13■□□□□ 0.01
PRKN-204ENST00000366896 DHDDSQ86SQ9 333 aa15.13■□□□□ 0.01
PRKN-204ENST00000366896 LCA5Q86VQ0 697 aa15.13■□□□□ 0.01
PRKN-204ENST00000366896 RASSF3Q86WH2 238 aa15.13■□□□□ 0.01
PRKN-204ENST00000366896 NT5DC4Q86YG4 428 aa15.13■□□□□ 0.01
PRKN-204ENST00000366896 ARID3BQ8IVW6 561 aaPredicted RBP15.13■□□□□ 0.01
PRKN-204ENST00000366896 MTG1Q9BT17 334 aaPredicted RBP15.13■□□□□ 0.01
PRKN-204ENST00000366896 KATNAL1Q9BW62 490 aa15.13■□□□□ 0.01
PRKN-204ENST00000366896 UNC93B1Q9H1C4 597 aa15.13■□□□□ 0.01
PRKN-204ENST00000366896 ETNK2Q9NVF9 386 aa15.13■□□□□ 0.01
PRKN-204ENST00000366896 SORCS3Q9UPU3 1222 aa15.13■□□□□ 0.01
PRKN-204ENST00000366896 SCN10AQ9Y5Y9 1956 aa15.13■□□□□ 0.01
PRKN-204ENST00000366896 KAT6AQ92794 2004 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 A0A088AWK7 358 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 C22orf31O95567 290 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 APRTP07741 180 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 PFKMP08237 780 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 SPATA31D3P0C874 917 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 SETSIPP0DME0 302 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 CRHR1P34998 444 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 NDST1P52848 882 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 BCAR1P56945 870 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 IGBP1P78318 339 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 ASPHQ12797 758 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 GRIK4Q16099 956 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 CCDC14Q49A88 953 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 CXCL17Q6UXB2 119 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 SPATA31D4Q6ZUB0 917 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 ARCQ7LC44 396 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 SLC25A41Q8N5S1 370 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 C12orf29Q8N999 325 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 E2F7Q96AV8 911 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 CPB2Q96IY4 423 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 IFT122Q9HBG6 1241 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 SMIM31A0A1B0GVY4 71 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 FAM159BA6NKW6 160 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 CYB561D2O14569 222 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 SNNO75324 88 aaPredicted RBP15.12■□□□□ 0.01
PRKN-204ENST00000366896 ZBED1O96006 694 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 CSH1P0DML2 217 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 CSH2P0DML3 217 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 SMIM10L2AP0DMW4 78 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 SMIM10L2BP0DMW5 78 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 UQCRBP14927 111 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 CPOXP36551 454 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 KCNA10Q16322 511 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 TEX44Q53QW1 395 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 SFT2D3Q587I9 215 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 CDKL3Q8IVW4 592 aaPredicted RBP15.12■□□□□ 0.01
PRKN-204ENST00000366896 PCDH19Q8TAB3 1148 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 PPP1R13LQ8WUF5 828 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 HPDLQ96IR7 371 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 SLC13A1Q9BZW2 595 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 EPB41L1Q9H4G0 881 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 PCDH18Q9HCL0 1135 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 NGRNQ9NPE2 291 aaKnown RBP15.12■□□□□ 0.01
PRKN-204ENST00000366896 GTF2IRD1Q9UHL9 959 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 TSPAN16Q9UKR8 245 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 ITGA11Q9UKX5 1188 aa15.12■□□□□ 0.01
PRKN-204ENST00000366896 PRR5-ARHGAP8B1AHC4 643 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 OPHN1O60890 802 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 GCATO75600 419 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 VAV1P15498 845 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 ARHGAP8P85298 464 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 XIAPP98170 497 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 MSLNQ13421 630 aaPredicted RBP15.11■□□□□ 0.01
PRKN-204ENST00000366896 MARCH8Q5T0T0 291 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 RNF111Q6ZNA4 994 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 RNF180Q86T96 592 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 SPATA24Q86W54 205 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 CCDC33Q8N5R6 958 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 GSTCDQ8NEC7 633 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 GSDMBQ8TAX9 411 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 ACAP3Q96P50 834 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 SOX13Q9UN79 622 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 ATP9BO43861 1147 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 ASGR1P07306 291 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 SERPINA6P08185 405 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 ZFXP17010 805 aaPredicted RBP15.11■□□□□ 0.01
PRKN-204ENST00000366896 DESP17661 470 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 AQP5P55064 265 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 TMPRSS15P98073 1019 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 TRMT10BQ6PF06 316 aaKnown RBP15.11■□□□□ 0.01
PRKN-204ENST00000366896 FBXO46Q6PJ61 603 aaPredicted RBP15.11■□□□□ 0.01
PRKN-204ENST00000366896 ZDHHC17Q8IUH5 632 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 MPP5Q8N3R9 675 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 PCSK9Q8NBP7 692 aaKnown RBP15.11■□□□□ 0.01
PRKN-204ENST00000366896 HIC2Q96JB3 615 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 SIGLEC10Q96LC7 697 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 GCOM2Q9BZD3 368 aaPredicted RBP15.11■□□□□ 0.01
PRKN-204ENST00000366896 PDZD7Q9H5P4 517 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 STN1Q9H668 368 aaKnown RBP15.11■□□□□ 0.01
PRKN-204ENST00000366896 XAB2Q9HCS7 855 aaKnown RBP15.11■□□□□ 0.01
PRKN-204ENST00000366896 PAK6Q9NQU5 681 aaPredicted RBP15.11■□□□□ 0.01
PRKN-204ENST00000366896 SETD4Q9NVD3 440 aa15.11■□□□□ 0.01
PRKN-204ENST00000366896 CHCHD3Q9NX63 227 aaKnown RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms