RNA–Protein interactions for RNA: ENST00000364007.1

RNU6-560P-201, Transcript of RNA, U6 small nuclear 560, pseudogene, humanhuman

BASIC

Gene RNU6-560P, Length 108 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-560P-201ENST00000364007 P2RY11Q96G91 374 aa4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 FCRL5Q96RD9 977 aa4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 CRAMP1Q96RY5 1269 aa4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 ZNF347Q96SE7 839 aa4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 TRIM2Q9C040 744 aa4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 SFXN1Q9H9B4 322 aa4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 MTMR4Q9NYA4 1195 aa4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 DERAQ9Y315 318 aa4.79□□□□□ -1.64
RNU6-560P-201ENST00000364007 SPATA31A5Q5VU36 1347 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 SPATA31A7Q8IWB4 1347 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 GRM8O00222 908 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 TFRCP02786 760 aaKnown RBP4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 CSF1P09603 554 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 ACP5P13686 325 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 CHN1P15882 459 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 CNTFP26441 200 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 TACR3P29371 465 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 HOXA7P31268 230 aaPredicted RBP4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 MAPK9P45984 424 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 PCP4P48539 62 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 CDK18Q07002 472 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 SLC10A2Q12908 348 aaPredicted RBP4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 ANXA2RQ3ZCQ2 193 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 MIS18BP1Q6P0N0 1132 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 TMEM88Q6PEY1 159 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 RBM44Q6ZP01 1051 aaKnown RBP4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 ANKS1BQ7Z6G8 1248 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 CPOQ8IVL8 374 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 TMEM57Q8N5G2 664 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 PTGR2Q8N8N7 351 aaPredicted RBP4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 FSIP1Q8NA03 581 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 LINS1Q8NG48 757 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 CEP70Q8NHQ1 597 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 PIGKQ92643 395 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 KTI12Q96EK9 354 aaPredicted RBP4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 PIGSQ96S52 555 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 PYM1Q9BRP8 204 aaKnown RBP4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 HTATIP2Q9BUP3 242 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 HDHD5Q9BXW7 423 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 RIC8AQ9NPQ8 531 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 TLR8Q9NR97 1041 aaKnown RBP4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 GGA3Q9NZ52 723 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 PTGFRNQ9P2B2 879 aa4.78□□□□□ -1.64
RNU6-560P-201ENST00000364007 CCDC189A1A4V9 331 aa4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 SLC22A23A1A5C7 686 aa4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 CGB1A6NKQ9 187 aa4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 PPP6CO00743 305 aa4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 TP73O15350 636 aa4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 INPPL1O15357 1258 aa4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 RNF8O76064 485 aa4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 PLAUP00749 431 aa4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 TUBB4AP04350 444 aa4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 PYGLP06737 847 aa4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 POLBP06746 335 aa4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 B4GALNT1Q00973 533 aa4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 FOXF2Q12947 444 aa4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 ZNF268Q14587 947 aaPredicted RBP4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 MEX3CQ5U5Q3 659 aaKnown RBP4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 ZNF474Q6S9Z5 364 aaPredicted RBP4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 KCNJ9Q92806 393 aa4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 ATP2A3Q93084 1043 aa4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 RBM17Q96I25 401 aaKnown RBP4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 NPAS1Q99742 590 aa4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 CLPBQ9H078 707 aa4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 MAFFQ9ULX9 164 aa4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 DNAJC16Q9Y2G8 782 aa4.77□□□□□ -1.65
RNU6-560P-201ENST00000364007 EMSYQ7Z589 1322 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 SMIM35A0A1B0GVV1 85 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 NPIPB13A6NJU9 1138 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 NPIPB5A8MRT5 1133 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 NPIPB4C9JG80 1138 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 DSCR3O14972 297 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 HNRNPRO43390 633 aaKnown RBP4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 AKR1A1P14550 325 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 TGM2P21980 687 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 RPS6KB1P23443 525 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 PRPH2P23942 346 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 AVPR2P30518 371 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 ARHGAP25P42331 645 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 PAPOLAP51003 745 aaKnown RBP4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 SLC12A1Q13621 1099 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 TAF12Q16514 161 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 SUPT20HL1Q3ZLR7 823 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 GLE1Q53GS7 698 aaKnown RBP4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 EARS2Q5JPH6 523 aaKnown RBP4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 MTFR2Q6P444 385 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 RINLQ6ZS11 566 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 MDGA2Q7Z553 956 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 YTHDF3Q7Z739 585 aaKnown RBP4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 TMEM200AQ86VY9 491 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 UEVLDQ8IX04 471 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 GALNT16Q8N428 558 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 ARL14EPQ8N8R7 260 aaPredicted RBP4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 ADPRHL1Q8NDY3 354 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 IGFBPL1Q8WX77 278 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 IP6K1Q92551 441 aa4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 ADAD1Q96M93 576 aaKnown RBP4.76□□□□□ -1.65
RNU6-560P-201ENST00000364007 TWNKQ96RR1 684 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms