RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 NPIPB13A6NJU9 1138 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 FAM90A7PA6NKC0 464 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 SH2D7A6NKC9 451 aaPredicted RBP4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 NPIPB5A8MRT5 1133 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 FAM90A22PA8MWA6 464 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 FAM90A12PA8MX19 464 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 FAM90A23PA8MXZ1 464 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 NPIPB4C9JG80 1138 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 PRYO14603 147 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 FYB1O15117 783 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 NARSO43776 548 aaKnown RBP4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 RTN3O95197 1032 aaPredicted RBP4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 METTL18O95568 372 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 F9P00740 461 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 LDHCP07864 332 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 WEE2P0C1S8 567 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 PRPH2P23942 346 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 NDUFS1P28331 727 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 AVPR2P30518 371 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 HOXD12P35452 270 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 STAT6P42226 847 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 GPD2P43304 727 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 ZNF84P51523 738 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 MVDP53602 400 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 SLC37A1P57057 533 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 DCAF7P61962 342 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 CYP4F2P78329 520 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 GPATCH4Q5T3I0 446 aaKnown RBP4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 CFAP161Q6P656 301 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 NEK10Q6ZWH5 1172 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 H1FNTQ75WM6 255 aaPredicted RBP4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 SPRED1Q7Z699 444 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 VRK3Q8IV63 474 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 ADGRF3Q8IZF5 1079 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 EXD3Q8N9H8 876 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 ADPRHL1Q8NDY3 354 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 ZCCHC10Q8TBK6 192 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 ADAMTS15Q8TE58 950 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 ADAMTS18Q8TE60 1221 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 TLR8Q9NR97 1041 aaKnown RBP4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 PPP1R14DQ9NXH3 145 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 TFCP2L1Q9NZI6 479 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 SLC25A10Q9UBX3 287 aaPredicted RBP4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 ST3GAL5Q9UNP4 418 aa4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 TDRD9Q8NDG6 1382 aaKnown RBP4.13□□□□□ -1.75
RNU6-28P-201ENST00000362378 GOLGA6L10A0A0M3HER8 536 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 A0A1W2PPH5 198 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 PRSS47A8MTI9 375 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 BTBD19C9JJ37 291 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 H7C1Q1 480 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 CLIC1O00299 241 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 SPTLC2O15270 562 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 USO1O60763 962 aaKnown RBP4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 ZNF202O95125 648 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 SLC3A2P08195 630 aaKnown RBP4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 LYL1P12980 280 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 ARSAP15289 507 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 RARRES1P49788 294 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 RPS6KA3P51812 740 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 RPP30P78346 268 aaKnown RBP4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 DMWDQ09019 674 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 ALKBH1Q13686 389 aaKnown RBP4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 MFSD13AQ14CX5 517 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 LARS2Q15031 903 aaKnown RBP4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 NFIL3Q16649 462 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 TSTQ16762 297 aaKnown RBP4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 RUNDC3AQ59EK9 446 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 CCDC30Q5VVM6 783 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 INO80CQ6PI98 192 aaPredicted RBP4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 NAPRTQ6XQN6 538 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 GRASPQ7Z6J2 395 aaPredicted RBP4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 ULK2Q8IYT8 1036 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 UCMAQ8WVF2 138 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 ATP2A3Q93084 1043 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 RNFT2Q96EX2 444 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 HIC2Q96JB3 615 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 CD180Q99467 661 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 TREX2Q9BQ50 279 aaPredicted RBP4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 KLQ9UEF7 1012 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 CNPY2Q9Y2B0 182 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 SIRT4Q9Y6E7 314 aaPredicted RBP4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 SPATA31A5Q5VU36 1347 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 SPATA31A6Q5VVP1 1343 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 SPATA31A7Q8IWB4 1347 aa4.12□□□□□ -1.75
RNU6-28P-201ENST00000362378 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 TCRBV5S1A1TA0A578 114 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 PGPEP1LA6NFU8 196 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 GAGE10A6NGK3 116 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 RNASEH2AO75792 299 aaKnown RBP4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 CNTN5O94779 1100 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 SGPL1O95470 568 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 CENPBP07199 599 aaPredicted RBP4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 ALDOCP09972 364 aaKnown RBP4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 RFPL3SP0C7P2 107 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 HOXB9P17482 250 aaPredicted RBP4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 PRKCHP24723 683 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 ADPRHP54922 357 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 SOX10P56693 466 aa4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 SIM1P81133 766 aaPredicted RBP4.11□□□□□ -1.75
RNU6-28P-201ENST00000362378 SHC2P98077 582 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms