RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 GALNT8Q9NY28 637 aa14.21□□□□□ -0.13
COL6A1-201ENST00000361866 AFF4Q9UHB7 1163 aaKnown RBP14.21□□□□□ -0.13
COL6A1-201ENST00000361866 KIAA1257Q9ULG3 409 aa14.21□□□□□ -0.13
COL6A1-201ENST00000361866 PARNO95453 639 aaKnown RBP14.21□□□□□ -0.13
COL6A1-201ENST00000361866 APOA4P06727 396 aa14.21□□□□□ -0.13
COL6A1-201ENST00000361866 IL1R2P27930 398 aa14.21□□□□□ -0.13
COL6A1-201ENST00000361866 BCAT1P54687 386 aa14.21□□□□□ -0.13
COL6A1-201ENST00000361866 FASTKQ14296 549 aaKnown RBP14.21□□□□□ -0.13
COL6A1-201ENST00000361866 NOMO1Q15155 1222 aa14.21□□□□□ -0.13
COL6A1-201ENST00000361866 SGO1Q5FBB7 561 aa14.21□□□□□ -0.13
COL6A1-201ENST00000361866 EZH1Q92800 747 aaPredicted RBP14.21□□□□□ -0.13
COL6A1-201ENST00000361866 GFM2Q969S9 779 aaKnown RBP14.21□□□□□ -0.13
COL6A1-201ENST00000361866 COG4Q9H9E3 785 aa14.21□□□□□ -0.13
COL6A1-201ENST00000361866 MAGEB2O15479 319 aa14.21□□□□□ -0.14
COL6A1-201ENST00000361866 CCDC153Q494R4 210 aa14.21□□□□□ -0.14
COL6A1-201ENST00000361866 PACS1Q6VY07 963 aa14.21□□□□□ -0.14
COL6A1-201ENST00000361866 CCDC81Q6ZN84 652 aa14.21□□□□□ -0.14
COL6A1-201ENST00000361866 TAS2R42Q7RTR8 314 aa14.21□□□□□ -0.14
COL6A1-201ENST00000361866 SATL1Q86VE3 508 aa14.21□□□□□ -0.14
COL6A1-201ENST00000361866 PLD5Q8N7P1 536 aa14.21□□□□□ -0.14
COL6A1-201ENST00000361866 CHST13Q8NET6 341 aa14.21□□□□□ -0.14
COL6A1-201ENST00000361866 PRR11Q96HE9 360 aaPredicted RBP14.21□□□□□ -0.14
COL6A1-201ENST00000361866 FICDQ9BVA6 458 aa14.21□□□□□ -0.14
COL6A1-201ENST00000361866 GPRC5DQ9NZD1 345 aa14.21□□□□□ -0.14
COL6A1-201ENST00000361866 COMMD3-BMI1R4GMX3 469 aa14.21□□□□□ -0.14
COL6A1-201ENST00000361866 TOPAZ1Q8N9V7 1692 aa14.21□□□□□ -0.14
COL6A1-201ENST00000361866 MRASO14807 208 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 TCEA3O75764 348 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 LYPLA2O95372 231 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 HNRNPLP14866 589 aaKnown RBP eCLIP14.2□□□□□ -0.14
COL6A1-201ENST00000361866 KLRC2P26717 231 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 ZNF470Q6ECI4 717 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 ZC3H3Q8IXZ2 948 aaKnown RBP14.2□□□□□ -0.14
COL6A1-201ENST00000361866 PQLC1Q8N2U9 271 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 ZNF358Q9NW07 568 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 UTP6Q9NYH9 597 aaKnown RBP14.2□□□□□ -0.14
COL6A1-201ENST00000361866 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.2□□□□□ -0.14
COL6A1-201ENST00000361866 C1orf232A0A0U1RR37 186 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 CXorf49A8MYA2 514 aaPredicted RBP14.2□□□□□ -0.14
COL6A1-201ENST00000361866 CSH1P0DML2 217 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 CSH2P0DML3 217 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 CYP2C8P10632 490 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 GRIA1P42261 906 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 RPL14P50914 215 aaKnown RBP14.2□□□□□ -0.14
COL6A1-201ENST00000361866 OGDHQ02218 1023 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 PTP4A2Q12974 167 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 ZNF235Q14590 738 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 ARCQ7LC44 396 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 GALNT15Q8N3T1 639 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 FBXW8Q8N3Y1 598 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 URGCPQ8TCY9 931 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 BLOC1S5Q8TDH9 187 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 SLCO2A1Q92959 643 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 LENG8Q96PV6 779 aaPredicted RBP14.2□□□□□ -0.14
COL6A1-201ENST00000361866 ACE2Q9BYF1 805 aaPredicted RBP14.2□□□□□ -0.14
COL6A1-201ENST00000361866 ARHGAP28Q9P2N2 729 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 KIF1AQ12756 1690 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 A0A0A0MRY4 1105 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 ZNF839A8K0R7 811 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 ERI2A8K979 691 aaKnown RBP14.2□□□□□ -0.14
COL6A1-201ENST00000361866 FESP07332 822 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 ZNF286BP0CG31 522 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 HSPA1AP0DMV8 641 aaKnown RBP14.2□□□□□ -0.14
COL6A1-201ENST00000361866 HSPA1BP0DMV9 641 aaKnown RBP14.2□□□□□ -0.14
COL6A1-201ENST00000361866 GRIA4P48058 902 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 GALK1P51570 392 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 DCTN2Q13561 401 aaKnown RBP14.2□□□□□ -0.14
COL6A1-201ENST00000361866 KRT72Q14CN4 511 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 AGAP9Q5VTM2 703 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 EFHBQ8N7U6 833 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 FAM81AQ8TBF8 368 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 FAXDC2Q96IV6 333 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 SPATA13Q96N96 652 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 OSMRQ99650 979 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 SLC4A5Q9BY07 1137 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 CDT1Q9H211 546 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 PCDH18Q9HCL0 1135 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 SNX15Q9NRS6 342 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 CDH22Q9UJ99 828 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 C5P01031 1676 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 TAF6P49848 677 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 TKTL1P51854 596 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 KCNK10P57789 538 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 GALNTL6Q49A17 601 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 GJC2Q5T442 439 aaPredicted RBP14.2□□□□□ -0.14
COL6A1-201ENST00000361866 GRTP1Q5TC63 336 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 KCTD4Q8WVF5 259 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 C7orf43Q8WVR3 580 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 NPAS2Q99743 824 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 TXLNGYQ9BZA5 131 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 SYBUQ9NX95 663 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 MYRFQ9Y2G1 1151 aa14.2□□□□□ -0.14
COL6A1-201ENST00000361866 ZNF536O15090 1300 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 ABLIM1O14639 778 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 VNN1O95497 513 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 LINGO3P0C6S8 592 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 MPSTP25325 297 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 GRIK1P39086 918 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 KLF10Q13118 480 aa14.19□□□□□ -0.14
COL6A1-201ENST00000361866 TRIM16LQ309B1 348 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms