RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 F5H5T6 163 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 PSMG1O95456 288 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 HSPA1AP0DMV8 641 aaKnown RBP16.7■□□□□ 0.26
SCAF1-201ENST00000360565 HSPA1BP0DMV9 641 aaKnown RBP16.7■□□□□ 0.26
SCAF1-201ENST00000360565 ERCC2P18074 760 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 SLC25A3Q00325 362 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 PPIL2Q13356 520 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 TMC7Q7Z402 723 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 FNIP1Q8TF40 1166 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 C5P01031 1676 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 C2orf81A6NN90 581 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 ERI2A8K979 691 aaKnown RBP16.7■□□□□ 0.26
SCAF1-201ENST00000360565 CILPO75339 1184 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 ESRRBO95718 433 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 AKT1P31749 480 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 SLC11A2P49281 568 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 RENBPP51606 427 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 GBE1Q04446 702 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 ELMOD1Q8N336 334 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 PGLYRP2Q96PD5 576 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 VAT1Q99536 393 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 RNPEPQ9H4A4 650 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 UTP6Q9NYH9 597 aaKnown RBP16.7■□□□□ 0.26
SCAF1-201ENST00000360565 LMCD1Q9NZU5 365 aa16.7■□□□□ 0.26
SCAF1-201ENST00000360565 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.69■□□□□ 0.26
SCAF1-201ENST00000360565 HDAC4P56524 1084 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 ZNF177Q13360 481 aaPredicted RBP16.69■□□□□ 0.26
SCAF1-201ENST00000360565 FUT11Q495W5 492 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 RNASEH2BQ5TBB1 312 aaKnown RBP16.69■□□□□ 0.26
SCAF1-201ENST00000360565 PYDC1Q8WXC3 89 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 DCUN1D1Q96GG9 259 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 ZNF333Q96JL9 665 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 GOLGA4Q13439 2230 aaKnown RBP16.69■□□□□ 0.26
SCAF1-201ENST00000360565 KRT36O76013 467 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 PTDSS1P48651 473 aaKnown RBP16.69■□□□□ 0.26
SCAF1-201ENST00000360565 FNBP1LQ5T0N5 605 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 THEMIS2Q5TEJ8 643 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 LCLAT1Q6UWP7 414 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 TSHZ1Q6ZSZ6 1077 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 HIC2Q96JB3 615 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 CDRT15Q96T59 188 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 LSM7Q9UK45 103 aaKnown RBP16.69■□□□□ 0.26
SCAF1-201ENST00000360565 NRCAMQ92823 1304 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 ATXN2Q99700 1313 aaKnown RBP16.69■□□□□ 0.26
SCAF1-201ENST00000360565 COL14A1Q05707 1796 aaKnown RBP16.69■□□□□ 0.26
SCAF1-201ENST00000360565 CLDN5O00501 218 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 PMM2O15305 246 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 GLP2RO95838 553 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 LACTB2Q53H82 288 aaPredicted RBP16.69■□□□□ 0.26
SCAF1-201ENST00000360565 PLD5Q8N7P1 536 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 TBC1D13Q9NVG8 400 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 FAM155BO75949 473 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 MYO1DO94832 1006 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 VNN1O95497 513 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 ATP4AP20648 1035 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 AASDHQ4L235 1098 aaPredicted RBP16.69■□□□□ 0.26
SCAF1-201ENST00000360565 MFN1Q8IWA4 741 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 CYP4X1Q8N118 509 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 C18orf25Q96B23 403 aaPredicted RBP16.69■□□□□ 0.26
SCAF1-201ENST00000360565 ZCWPW1Q9H0M4 648 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 NXF3Q9H4D5 531 aaKnown RBP16.69■□□□□ 0.26
SCAF1-201ENST00000360565 PCDHA11Q9Y5I1 949 aa16.69■□□□□ 0.26
SCAF1-201ENST00000360565 KLRG2A4D1S0 409 aaPredicted RBP16.68■□□□□ 0.26
SCAF1-201ENST00000360565 ZNF197O14709 1029 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 NFKB1P19838 968 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 MATKP42679 507 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 SCNN1BP51168 640 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 SCNN1GP51170 649 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 TAF5Q15542 800 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 EFL1Q7Z2Z2 1120 aaKnown RBP16.68■□□□□ 0.26
SCAF1-201ENST00000360565 TNS4Q8IZW8 715 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 MTMR14Q8NCE2 650 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 SLC44A1Q8WWI5 657 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 PRDM5Q9NQX1 630 aaPredicted RBP16.68■□□□□ 0.26
SCAF1-201ENST00000360565 GEMIN8Q9NWZ8 242 aaKnown RBP16.68■□□□□ 0.26
SCAF1-201ENST00000360565 KIF17Q9P2E2 1029 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 PCDHGB4Q9UN71 923 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 KIF13AQ9H1H9 1805 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 E7ENQ6 273 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 NR5A2O00482 541 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 GRM5P41594 1212 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 SKIV2L2P42285 1042 aaKnown RBP16.68■□□□□ 0.26
SCAF1-201ENST00000360565 RNF180Q86T96 592 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 ALYREFQ86V81 257 aaKnown RBP16.68■□□□□ 0.26
SCAF1-201ENST00000360565 LZTR1Q8N653 840 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 BTBD7Q9P203 1132 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 PACSIN3Q9UKS6 424 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 PCDHGC3Q9UN70 934 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 VPS26AO75436 327 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 ZMPSTE24O75844 475 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 ITGA2BP08514 1039 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 NAB1Q13506 487 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 LRRC52Q8N7C0 313 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 PIK3R5Q8WYR1 880 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 ZNF184Q99676 751 aaPredicted RBP16.68■□□□□ 0.26
SCAF1-201ENST00000360565 SIKE1Q9BRV8 207 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 IL22Q9GZX6 179 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 VPS9D1Q9Y2B5 631 aa16.68■□□□□ 0.26
SCAF1-201ENST00000360565 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.68■□□□□ 0.26
SCAF1-201ENST00000360565 ZBTB24O43167 697 aaPredicted RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms