RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 PLEKP08567 350 aaPredicted RBP13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 GALK1P51570 392 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 TOP3AQ13472 1001 aaPredicted RBP13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 FASTKQ14296 549 aaKnown RBP13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 DENND5AQ6IQ26 1287 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 ULK3Q6PHR2 472 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 PACS1Q6VY07 963 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 RNF148Q8N7C7 305 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 WDCPQ9H6R7 721 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 UBP1Q9NZI7 540 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 LIMD1Q9UGP4 676 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 CCDC154A6NI56 674 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 ECE2O60344 883 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 ZNF806P0C7X5 589 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 EPHA7Q15375 998 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 STRIP1Q5VSL9 837 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 GPR107Q5VW38 600 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 ZNF614Q8N883 585 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 C7orf25Q9BPX7 421 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 SLC39A8Q9C0K1 460 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 CAMSAP1Q5T5Y3 1602 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 TXNP10599 105 aaKnown RBP13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 BTN3A2P78410 334 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 SCAIQ8N9R8 606 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 CDRT15Q96T59 188 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 ICE1Q9Y2F5 2266 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 HEG1Q9ULI3 1381 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 CCNKO75909 580 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 PRLRP16471 622 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 TFDP3Q5H9I0 405 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 ACTRT1Q8TDG2 376 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 ZSWIM1Q9BR11 485 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 SLC24A2Q9UI40 661 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 PHF11Q9UIL8 331 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 NEO1Q92859 1461 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 ARHGEF5Q12774 1597 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 C15orf38-AP3S2A0A0A6YYH1 394 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 TTLL13PA6NNM8 815 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 ACSL4O60488 711 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 PROCP04070 461 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 ARF4P18085 180 aaPredicted RBP13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 ELAVL2Q12926 359 aaKnown RBP13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 TYSND1Q2T9J0 566 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 ARPINQ7Z6K5 226 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 STRA8Q7Z7C7 330 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 FAM49BQ9NUQ9 324 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 THAP1Q9NVV9 213 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 PZPP20742 1482 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 GRIN3BO60391 1043 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 GPD1P21695 349 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 DENND5BQ6ZUT9 1274 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 B3GALNT2Q8NCR0 500 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 HTRA1Q92743 480 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 SIPA1Q96FS4 1042 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 GSDMCQ9BYG8 508 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 C12orf4Q9NQ89 552 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 MCUBQ9NWR8 336 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 NAALADL1Q9UQQ1 740 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 PCDHGB3Q9Y5G1 929 aa13.47□□□□□ -0.25
SRGAP3-201ENST00000360413 TFECO14948 347 aaPredicted RBP13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 TPBGLP0DKB5 382 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 CPA3P15088 417 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 SP100P23497 879 aaPredicted RBP13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 MGAT5BQ3V5L5 792 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 RPTNQ6XPR3 784 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 FEZF2Q8TBJ5 459 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 SPPL2AQ8TCT8 520 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 ATG4AQ8WYN0 398 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 DUSP10Q9Y6W6 482 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 SDR42E2A6NKP2 422 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 GPR182O15218 404 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 KPNA6O60684 536 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 NMT1P30419 496 aaKnown RBP13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 MAGEE2Q8TD90 523 aaPredicted RBP13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 COX4I2Q96KJ9 171 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 PHF20Q9BVI0 1012 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 MROH7-TTC4A0A0A0MT08 1334 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 HOXB8P17481 243 aaPredicted RBP13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 DSG3P32926 999 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 RFX3P48380 749 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 RAB25P57735 213 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 NAGPAQ9UK23 515 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 ABCA8O94911 1581 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 H7C1W4 665 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 SPIDRQ14159 915 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 SLC45A4Q5BKX6 768 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 YTHDF3Q7Z739 585 aaKnown RBP13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 BPIFB6Q8NFQ5 453 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 ZHX1-C8orf76Q96EF9 292 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 REXO5Q96IC2 774 aaKnown RBP13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 LRRC4BQ9NT99 713 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 NDUFAF1Q9Y375 327 aa13.46□□□□□ -0.25
SRGAP3-201ENST00000360413 NOS1APO75052 506 aaPredicted RBP13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 SKIV2L2P42285 1042 aaKnown RBP13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 SNRNP35Q16560 246 aaKnown RBP13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 SAMD4BQ5PRF9 694 aaKnown RBP13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 RIT1Q92963 219 aa13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 ZNF335Q9H4Z2 1342 aaPredicted RBP13.46□□□□□ -0.26
SRGAP3-201ENST00000360413 OR6B1O95007 311 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms