RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 ATXN3P54252 364 aaPredicted RBP11.46□□□□□ -0.57
SSU72-202ENST00000359060 NBPF20Q3BBV1 942 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 GRAMD1BQ3KR37 738 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 SPOUT1Q5T280 376 aaKnown RBP11.46□□□□□ -0.57
SSU72-202ENST00000359060 TFAP2DQ7Z6R9 452 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 ANKRD23Q86SG2 305 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 PPHLN1Q8NEY8 458 aaKnown RBP11.46□□□□□ -0.57
SSU72-202ENST00000359060 TTC8Q8TAM2 541 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 CERS2Q96G23 380 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 PGLYRP2Q96PD5 576 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 QKIQ96PU8 341 aaKnown RBP eCLIP11.46□□□□□ -0.57
SSU72-202ENST00000359060 APBA2Q99767 749 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 CCDC68Q9H2F9 335 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 AIM2O14862 343 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 DAB1O75553 588 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 DGKIO75912 1065 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 ITGA2BP08514 1039 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 CLCNKBP51801 687 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 CRYMQ14894 314 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 PPM1JQ5JR12 505 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 SPRYD7Q5W111 196 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 OLFML2BQ68BL8 750 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 IL31Q6EBC2 164 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 TRNP1Q6NT89 227 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 PACS1Q6VY07 963 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 FAM13CQ8NE31 585 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 C10orf82Q8WW14 230 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 INPP5DQ92835 1189 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 FICDQ9BVA6 458 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 SAR1AQ9NR31 198 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 TRPV2Q9Y5S1 764 aa11.46□□□□□ -0.57
SSU72-202ENST00000359060 POLR2AP24928 1970 aaKnown RBP11.46□□□□□ -0.57
SSU72-202ENST00000359060 PHGDHO43175 533 aaKnown RBP11.46□□□□□ -0.58
SSU72-202ENST00000359060 TADA2AO75478 443 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 CD52P31358 61 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 OLIG2Q13516 323 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 KPNB1Q14974 876 aaKnown RBP11.46□□□□□ -0.58
SSU72-202ENST00000359060 RPS6KA2Q15349 733 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 ACAD11Q709F0 780 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 KCNMB4Q86W47 210 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 PSTKQ8IV42 348 aaKnown RBP11.46□□□□□ -0.58
SSU72-202ENST00000359060 DNAJC9Q8WXX5 260 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 ADAM2Q99965 735 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 MTG1Q9BT17 334 aaPredicted RBP11.46□□□□□ -0.58
SSU72-202ENST00000359060 FAM96AQ9H5X1 160 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 RBM22Q9NW64 420 aaKnown RBP eCLIP11.46□□□□□ -0.58
SSU72-202ENST00000359060 NDE1Q9NXR1 346 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 LRFN2Q9ULH4 789 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 NVLO15381 856 aaKnown RBP11.46□□□□□ -0.58
SSU72-202ENST00000359060 GCATO75600 419 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 TKTP29401 623 aaKnown RBP11.46□□□□□ -0.58
SSU72-202ENST00000359060 PMLP29590 882 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 SERPINB8P50452 374 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 MRPS6P82932 125 aaKnown RBP11.46□□□□□ -0.58
SSU72-202ENST00000359060 SOX4Q06945 474 aaPredicted RBP11.46□□□□□ -0.58
SSU72-202ENST00000359060 DNAL1Q4LDG9 190 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 CERCAMQ5T4B2 595 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 OSTM1Q86WC4 334 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 ZNF567Q8N184 647 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 TOP6BLQ8N6T0 577 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 HDAC11Q96DB2 347 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 CATSPERBQ9H7T0 1116 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 DCLRE1BQ9H816 532 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 ACSS2Q9NR19 701 aa11.46□□□□□ -0.58
SSU72-202ENST00000359060 DPYSL4O14531 572 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 GIPC1O14908 333 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 TOMM70O94826 608 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 VAPBO95292 243 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 RABGAP1LQ5R372 815 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 CAND1Q86VP6 1230 aaKnown RBP11.45□□□□□ -0.58
SSU72-202ENST00000359060 CRYBG2Q8N1P7 616 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 TMEM40Q8WWA1 233 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 MYLPFQ96A32 169 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 PCED1BQ96HM7 432 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 HNRNPABQ99729 332 aaKnown RBP11.45□□□□□ -0.58
SSU72-202ENST00000359060 CAB39LQ9H9S4 337 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 RNPEPL1Q9HAU8 725 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 DMAP1Q9NPF5 467 aaPredicted RBP11.45□□□□□ -0.58
SSU72-202ENST00000359060 CHST12Q9NRB3 414 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 TPSB2P20231 275 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 GCAP28676 217 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 SKIV2L2P42285 1042 aaKnown RBP11.45□□□□□ -0.58
SSU72-202ENST00000359060 AP2B1P63010 937 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 SLC10A2Q12908 348 aaPredicted RBP11.45□□□□□ -0.58
SSU72-202ENST00000359060 TPSAB1Q15661 275 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 SWT1Q5T5J6 900 aaKnown RBP11.45□□□□□ -0.58
SSU72-202ENST00000359060 NCBP2-AS2Q69YL0 99 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 SLC9A4Q6AI14 798 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 DENND1AQ8TEH3 1009 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 PDCD6IPQ8WUM4 868 aaKnown RBP11.45□□□□□ -0.58
SSU72-202ENST00000359060 RHOBTB2Q9BYZ6 727 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 LRMDAQ9H2I8 198 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 MORF4L1Q9UBU8 362 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 NCAM2O15394 837 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 KLHL2O95198 593 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 SERPINE1P05121 402 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 KPNA2P52292 529 aaKnown RBP11.45□□□□□ -0.58
SSU72-202ENST00000359060 PCBP1Q15365 356 aaKnown RBP eCLIP11.45□□□□□ -0.58
SSU72-202ENST00000359060 SDHAF4Q5VUM1 108 aa11.45□□□□□ -0.58
SSU72-202ENST00000359060 KLC3Q6P597 504 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms