RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 KLHL14Q9P2G3 628 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 PHTF1Q9UMS5 762 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 CEP290O15078 2479 aa15.32■□□□□ 0.04
GABPB1-202ENST00000359031 SDR42E2A6NKP2 422 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 TRIM49D1C9J1S8 452 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 I6L893 689 aaPredicted RBP15.31■□□□□ 0.04
GABPB1-202ENST00000359031 KRT38O76015 456 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 ADRA1DP25100 572 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 CNTFP26441 200 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 PSMB4P28070 264 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 HTR7P34969 479 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 CCNFP41002 786 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 YWHAHQ04917 246 aaPredicted RBP15.31■□□□□ 0.04
GABPB1-202ENST00000359031 CCDC15Q0P6D6 951 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 GALNT2Q10471 571 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 NAB1Q13506 487 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 FAM182AQ5T1J6 154 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 FAM47EQ6ZV65 393 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 SH2D5Q6ZV89 423 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 UBE2Q1Q7Z7E8 422 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 CHSY1Q86X52 802 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 SPATA2LQ8IUW3 424 aaPredicted RBP15.31■□□□□ 0.04
GABPB1-202ENST00000359031 PDCD7Q8N8D1 485 aaKnown RBP15.31■□□□□ 0.04
GABPB1-202ENST00000359031 DQX1Q8TE96 717 aaKnown RBP15.31■□□□□ 0.04
GABPB1-202ENST00000359031 SERAC1Q96JX3 654 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 TKTL2Q9H0I9 626 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 UNC93B1Q9H1C4 597 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 OSBPL2Q9H1P3 480 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 ABCF3Q9NUQ8 709 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 TMEM51Q9NW97 253 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 SEPT10Q9P0V9 454 aa15.31■□□□□ 0.04
GABPB1-202ENST00000359031 KLHL8Q9P2G9 620 aaPredicted RBP15.31■□□□□ 0.04
GABPB1-202ENST00000359031 CXorf49A8MYA2 514 aaPredicted RBP15.3■□□□□ 0.04
GABPB1-202ENST00000359031 GOLGA8RI6L899 631 aa15.3■□□□□ 0.04
GABPB1-202ENST00000359031 ALDH1A2O94788 518 aa15.3■□□□□ 0.04
GABPB1-202ENST00000359031 DHRS4L1P0CG22 281 aa15.3■□□□□ 0.04
GABPB1-202ENST00000359031 PGAM1P18669 254 aa15.3■□□□□ 0.04
GABPB1-202ENST00000359031 PTPN3P26045 913 aa15.3■□□□□ 0.04
GABPB1-202ENST00000359031 DSC1Q08554 894 aa15.3■□□□□ 0.04
GABPB1-202ENST00000359031 SF3A3Q12874 501 aaKnown RBP eCLIP15.3■□□□□ 0.04
GABPB1-202ENST00000359031 BRMS1LQ5PSV4 323 aa15.3■□□□□ 0.04
GABPB1-202ENST00000359031 TRAF7Q6Q0C0 670 aa15.3■□□□□ 0.04
GABPB1-202ENST00000359031 SLC24A5Q71RS6 500 aa15.3■□□□□ 0.04
GABPB1-202ENST00000359031 MARK2Q7KZI7 788 aaKnown RBP15.3■□□□□ 0.04
GABPB1-202ENST00000359031 LRRTM3Q86VH5 581 aa15.3■□□□□ 0.04
GABPB1-202ENST00000359031 ZNF75CPQ92670 426 aaPredicted RBP15.3■□□□□ 0.04
GABPB1-202ENST00000359031 TMEM209Q96SK2 561 aa15.3■□□□□ 0.04
GABPB1-202ENST00000359031 VAT1Q99536 393 aa15.3■□□□□ 0.04
GABPB1-202ENST00000359031 RXFP1Q9HBX9 757 aa15.3■□□□□ 0.04
GABPB1-202ENST00000359031 SMYD2Q9NRG4 433 aa15.3■□□□□ 0.04
GABPB1-202ENST00000359031 MOCS1Q9NZB8 636 aa15.3■□□□□ 0.04
GABPB1-202ENST00000359031 A0A1W2PPC1 479 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 IRAK2O43187 625 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 AMHP03971 560 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 ITGB1P05556 798 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 CSH1P0DML2 217 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 CSH2P0DML3 217 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 PYGBP11216 843 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 GRIA1P42261 906 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 ZNF33AQ06730 810 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 ITPRIPL1Q6GPH6 555 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 ZNF449Q6P9G9 518 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 NPWQ8N729 165 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 DEPDC1BQ8WUY9 529 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 SPOCK2Q92563 424 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 TTC17Q96AE7 1141 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 KLF6Q99612 283 aaPredicted RBP15.29■□□□□ 0.04
GABPB1-202ENST00000359031 PRO3102Q9H379 93 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 SMOC2Q9H3U7 446 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 ABCC13Q9NSE7 274 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 ARHGEF38Q9NXL2 777 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 SLC17A7Q9P2U7 560 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 OR12D3Q9UGF7 316 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 TRHDEQ9UKU6 1024 aa15.29■□□□□ 0.04
GABPB1-202ENST00000359031 WDR27A2RRH5 827 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 ERI2A8K979 691 aaKnown RBP15.28■□□□□ 0.04
GABPB1-202ENST00000359031 COPEO14579 308 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 LRIG2O94898 1065 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 EPHB2P29323 1055 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 GARSP41250 739 aaKnown RBP15.28■□□□□ 0.04
GABPB1-202ENST00000359031 ETV4P43268 484 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 SLC5A3P53794 718 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 FAM189BP81408 668 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 COG7P83436 770 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 EIF4EBP2Q13542 120 aaPredicted RBP15.28■□□□□ 0.04
GABPB1-202ENST00000359031 GALNTL6Q49A17 601 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 NOMO2Q5JPE7 1267 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 CLLU1OSQ5K130 101 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 TRMT10BQ6PF06 316 aaKnown RBP15.28■□□□□ 0.04
GABPB1-202ENST00000359031 PID1Q7Z2X4 250 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 PACS2Q86VP3 889 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 CCDC63Q8NA47 563 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 SLC43A3Q8NBI5 491 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 PXYLP1Q8TE99 480 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 LINC01599Q8WXQ3 324 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 CDKL2Q92772 493 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 RNF34Q969K3 372 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 FTHL17Q9BXU8 183 aa15.28■□□□□ 0.04
GABPB1-202ENST00000359031 IQCGQ9H095 443 aaKnown RBP15.28■□□□□ 0.04
GABPB1-202ENST00000359031 GBA3Q9H227 469 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms