RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 DRGXA6NNA5 263 aa26.18■■□□□ 1.78
SSBP3-202ENST00000357475 ARNTLO00327 626 aa26.18■■□□□ 1.78
SSBP3-202ENST00000357475 SLC9A3R1O14745 358 aaPredicted RBP26.18■■□□□ 1.78
SSBP3-202ENST00000357475 ZRANB2O95218 330 aaKnown RBP eCLIP26.18■■□□□ 1.785e-7■■□□□ 13.9
SSBP3-202ENST00000357475 CYP17A1P05093 508 aa26.18■■□□□ 1.78
SSBP3-202ENST00000357475 AMPD1P23109 780 aa26.18■■□□□ 1.78
SSBP3-202ENST00000357475 EPHB2P29323 1055 aa26.18■■□□□ 1.78
SSBP3-202ENST00000357475 CHKAP35790 457 aa26.18■■□□□ 1.78
SSBP3-202ENST00000357475 ADCY2Q08462 1091 aa26.18■■□□□ 1.78
SSBP3-202ENST00000357475 DPYSQ14117 519 aa26.18■■□□□ 1.78
SSBP3-202ENST00000357475 PDK2Q15119 407 aa26.18■■□□□ 1.78
SSBP3-202ENST00000357475 DHCR24Q15392 516 aa26.18■■□□□ 1.78
SSBP3-202ENST00000357475 CCDC50Q8IVM0 306 aa26.18■■□□□ 1.78
SSBP3-202ENST00000357475 RCOR2Q8IZ40 523 aa26.18■■□□□ 1.78
SSBP3-202ENST00000357475 SLC44A3Q8N4M1 653 aa26.18■■□□□ 1.78
SSBP3-202ENST00000357475 KIAA1958Q8N8K9 716 aa26.18■■□□□ 1.78
SSBP3-202ENST00000357475 IRF7Q92985 503 aa26.18■■□□□ 1.78
SSBP3-202ENST00000357475 TBC1D31Q96DN5 1066 aa26.18■■□□□ 1.78
SSBP3-202ENST00000357475 DDX50Q9BQ39 737 aaKnown RBP26.18■■□□□ 1.78
SSBP3-202ENST00000357475 NDFIP2Q9NV92 336 aa26.18■■□□□ 1.78
SSBP3-202ENST00000357475 ETNK2Q9NVF9 386 aa26.18■■□□□ 1.78
SSBP3-202ENST00000357475 GTSE1Q9NYZ3 720 aa26.18■■□□□ 1.78
SSBP3-202ENST00000357475 CLEC4EQ9ULY5 219 aa26.18■■□□□ 1.78
SSBP3-202ENST00000357475 MIA3Q5JRA6 1907 aa26.17■■□□□ 1.78
SSBP3-202ENST00000357475 H3BRJ5 948 aa26.17■■□□□ 1.78
SSBP3-202ENST00000357475 TBL1XO60907 577 aa26.17■■□□□ 1.78
SSBP3-202ENST00000357475 BMP1P13497 986 aa26.17■■□□□ 1.78
SSBP3-202ENST00000357475 HOXC13P31276 330 aa26.17■■□□□ 1.78
SSBP3-202ENST00000357475 TAZQ16635 292 aa26.17■■□□□ 1.78
SSBP3-202ENST00000357475 ANKRD20A8PQ5CZ79 823 aa26.17■■□□□ 1.78
SSBP3-202ENST00000357475 FYB2Q5VWT5 728 aa26.17■■□□□ 1.78
SSBP3-202ENST00000357475 LRRC31Q6UY01 552 aa26.17■■□□□ 1.78
SSBP3-202ENST00000357475 TFAP2DQ7Z6R9 452 aa26.17■■□□□ 1.78
SSBP3-202ENST00000357475 NETO2Q8NC67 525 aa26.17■■□□□ 1.78
SSBP3-202ENST00000357475 PCDH19Q8TAB3 1148 aa26.17■■□□□ 1.78
SSBP3-202ENST00000357475 FAF2Q96CS3 445 aa26.17■■□□□ 1.78
SSBP3-202ENST00000357475 OTUB2Q96DC9 234 aa26.17■■□□□ 1.78
SSBP3-202ENST00000357475 TMA16Q96EY4 203 aaKnown RBP26.17■■□□□ 1.78
SSBP3-202ENST00000357475 ARHGEF4Q9NR80 690 aa26.17■■□□□ 1.78
SSBP3-202ENST00000357475 CHADO15335 359 aa26.16■■□□□ 1.78
SSBP3-202ENST00000357475 ARL4AP40617 200 aa26.16■■□□□ 1.78
SSBP3-202ENST00000357475 ODF2Q5BJF6 829 aa26.16■■□□□ 1.78
SSBP3-202ENST00000357475 PQLC3Q8N755 202 aa26.16■■□□□ 1.78
SSBP3-202ENST00000357475 DDI1Q8WTU0 396 aa26.16■■□□□ 1.78
SSBP3-202ENST00000357475 COG1Q8WTW3 980 aa26.16■■□□□ 1.78
SSBP3-202ENST00000357475 ATXN2LQ8WWM7 1075 aaKnown RBP26.16■■□□□ 1.78
SSBP3-202ENST00000357475 RBM41Q96IZ5 413 aaKnown RBP26.16■■□□□ 1.78
SSBP3-202ENST00000357475 ASB2Q96Q27 587 aa26.16■■□□□ 1.78
SSBP3-202ENST00000357475 ZNF670Q9BS34 389 aa26.16■■□□□ 1.78
SSBP3-202ENST00000357475 HEMGNQ9BXL5 484 aa26.16■■□□□ 1.78
SSBP3-202ENST00000357475 PPARGC1AQ9UBK2 798 aaKnown RBP26.16■■□□□ 1.78
SSBP3-202ENST00000357475 ZNF212Q9UDV6 495 aa26.16■■□□□ 1.78
SSBP3-202ENST00000357475 SNX12Q9UMY4 172 aa26.16■■□□□ 1.78
SSBP3-202ENST00000357475 hCG_1818297A0A087WSY0 165 aa26.15■■□□□ 1.78
SSBP3-202ENST00000357475 CTAGE9A4FU28 777 aa26.15■■□□□ 1.78
SSBP3-202ENST00000357475 NEDD8-MDP1E9PL57 170 aa26.15■■□□□ 1.78
SSBP3-202ENST00000357475 ZNF185O15231 689 aa26.15■■□□□ 1.78
SSBP3-202ENST00000357475 NARSO43776 548 aaKnown RBP26.15■■□□□ 1.78
SSBP3-202ENST00000357475 HOXD9P28356 352 aaPredicted RBP26.15■■□□□ 1.78
SSBP3-202ENST00000357475 CASQ1P31415 396 aa26.15■■□□□ 1.78
SSBP3-202ENST00000357475 PDGFRLQ15198 375 aa26.15■■□□□ 1.78
SSBP3-202ENST00000357475 GAB4Q2WGN9 574 aa26.15■■□□□ 1.78
SSBP3-202ENST00000357475 ANO4Q32M45 955 aa26.15■■□□□ 1.78
SSBP3-202ENST00000357475 KAZNQ674X7 775 aa26.15■■□□□ 1.78
SSBP3-202ENST00000357475 NLRP14Q86W24 1093 aa26.15■■□□□ 1.78
SSBP3-202ENST00000357475 WFDC5Q8TCV5 224 aa26.15■■□□□ 1.78
SSBP3-202ENST00000357475 RNF157Q96PX1 679 aa26.15■■□□□ 1.78
SSBP3-202ENST00000357475 ZYG11BQ9C0D3 744 aa26.15■■□□□ 1.78
SSBP3-202ENST00000357475 IGSF9Q9P2J2 1179 aa26.15■■□□□ 1.78
SSBP3-202ENST00000357475 ERCC2P18074 760 aa26.14■■□□□ 1.78
SSBP3-202ENST00000357475 MPPE1Q53F39 396 aa26.14■■□□□ 1.78
SSBP3-202ENST00000357475 RABGAP1LQ5R372 815 aa26.14■■□□□ 1.78
SSBP3-202ENST00000357475 PAPD7Q5XG87 772 aaKnown RBP26.14■■□□□ 1.78
SSBP3-202ENST00000357475 MAP7D3Q8IWC1 876 aa26.14■■□□□ 1.78
SSBP3-202ENST00000357475 HJURPQ8NCD3 748 aaPredicted RBP26.14■■□□□ 1.78
SSBP3-202ENST00000357475 OR52K2Q8NGK3 314 aa26.14■■□□□ 1.78
SSBP3-202ENST00000357475 ATP2A3Q93084 1043 aa26.14■■□□□ 1.78
SSBP3-202ENST00000357475 OSBPL9Q96SU4 736 aa26.14■■□□□ 1.78
SSBP3-202ENST00000357475 BBS2Q9BXC9 721 aa26.14■■□□□ 1.78
SSBP3-202ENST00000357475 BRD9Q9H8M2 597 aa26.14■■□□□ 1.78
SSBP3-202ENST00000357475 ECT2Q9H8V3 914 aa26.14■■□□□ 1.78
SSBP3-202ENST00000357475 PRKAG3Q9UGI9 489 aa26.14■■□□□ 1.78
SSBP3-202ENST00000357475 NUP205Q92621 2012 aa26.14■■□□□ 1.77
SSBP3-202ENST00000357475 TCRBV7S2A1N4TA0A589 114 aa26.14■■□□□ 1.77
SSBP3-202ENST00000357475 DCLK1O15075 740 aa26.14■■□□□ 1.77
SSBP3-202ENST00000357475 PENKP01210 267 aaPredicted RBP26.14■■□□□ 1.77
SSBP3-202ENST00000357475 HCAR3P49019 387 aa26.14■■□□□ 1.77
SSBP3-202ENST00000357475 NUMBP49757 651 aa26.14■■□□□ 1.77
SSBP3-202ENST00000357475 AMPD2Q01433 879 aa26.14■■□□□ 1.77
SSBP3-202ENST00000357475 ACBD5Q5T8D3 534 aaPredicted RBP26.14■■□□□ 1.77
SSBP3-202ENST00000357475 NAIF1Q69YI7 327 aaPredicted RBP26.14■■□□□ 1.77
SSBP3-202ENST00000357475 C12orf40Q86WS4 652 aa26.14■■□□□ 1.77
SSBP3-202ENST00000357475 ZNF592Q92610 1267 aa26.14■■□□□ 1.77
SSBP3-202ENST00000357475 CHFRQ96EP1 664 aa26.14■■□□□ 1.77
SSBP3-202ENST00000357475 CARD9Q9H257 536 aa26.14■■□□□ 1.77
SSBP3-202ENST00000357475 RCOR3Q9P2K3 495 aaPredicted RBP26.14■■□□□ 1.77
SSBP3-202ENST00000357475 C19orf67A6NJJ6 358 aa26.13■■□□□ 1.77
SSBP3-202ENST00000357475 DAPK3O43293 454 aa26.13■■□□□ 1.77
SSBP3-202ENST00000357475 ZNF500O60304 480 aaPredicted RBP26.13■■□□□ 1.77
SSBP3-202ENST00000357475 NFATC1O95644 943 aa26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms