RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 MTA1Q13330 715 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 GIPC3Q8TF64 312 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 RPRD1AQ96P16 312 aaPredicted RBP13.11□□□□□ -0.31
SMC4-202ENST00000357388 AKAP7Q9P0M2 348 aaPredicted RBP13.11□□□□□ -0.31
SMC4-202ENST00000357388 GNG14A0A1W2PPG7 69 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 PTGES3LE9PB15 166 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 TRDMT1O14717 391 aaKnown RBP13.11□□□□□ -0.31
SMC4-202ENST00000357388 GLP2RO95838 553 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 PGAM1P18669 254 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 RAP1GAPP47736 663 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 GMPSP49915 693 aaPredicted RBP13.11□□□□□ -0.31
SMC4-202ENST00000357388 KPNA1P52294 538 aaPredicted RBP13.11□□□□□ -0.31
SMC4-202ENST00000357388 NME5P56597 212 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 STARD3Q14849 445 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 PTPAQ15257 358 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 RFX4Q33E94 735 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 OR56A4Q8NGH8 313 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 SMAD5Q99717 465 aaKnown RBP13.11□□□□□ -0.31
SMC4-202ENST00000357388 DGCR6LQ9BY27 220 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 EVA1BQ9NVM1 165 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 C3orf18Q9UK00 162 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 ZNF222Q9UK12 451 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 MGRN1O60291 552 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 PON1P27169 355 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 GRK4P32298 578 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 SUN5Q8TC36 379 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 C17orf50Q8WW18 174 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 REPS1Q96D71 796 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 MOV10Q9HCE1 1003 aaKnown RBP13.11□□□□□ -0.31
SMC4-202ENST00000357388 RAD18Q9NS91 495 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 CAPN6Q9Y6Q1 641 aa13.11□□□□□ -0.31
SMC4-202ENST00000357388 ERVK-7P63135 1459 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 A0A087X0T9 212 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 CKMP06732 381 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 FAM228BP0C875 321 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 SLC2A4P14672 509 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 LBPP18428 481 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 EPHB3P54753 998 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 RAB15P59190 212 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 DDR1Q08345 913 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 TAF5Q15542 800 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 ITIH5Q86UX2 942 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 SNX32Q86XE0 403 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 TCP10LQ8TDR4 215 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 AGAP11Q8TF27 550 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 TMEM237Q96Q45 408 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 YME1L1Q96TA2 773 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 MYOZ2Q9NPC6 264 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 CLN6Q9NWW5 311 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 PHF11Q9UIL8 331 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 NOS3P29474 1203 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 CD151P48509 253 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 ARPC4P59998 168 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 BNIP2Q12982 314 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 PRR5LQ6MZQ0 368 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 RBM43Q6ZSC3 357 aaKnown RBP13.1□□□□□ -0.31
SMC4-202ENST00000357388 PHACTR4Q8IZ21 702 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 B3GALNT2Q8NCR0 500 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 ZHX1-C8orf76Q96EF9 292 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 PTCD3Q96EY7 689 aaKnown RBP13.1□□□□□ -0.31
SMC4-202ENST00000357388 CDK5RAP1Q96SZ6 601 aaKnown RBP13.1□□□□□ -0.31
SMC4-202ENST00000357388 WDCPQ9H6R7 721 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 A1CFQ9NQ94 594 aaKnown RBP13.1□□□□□ -0.31
SMC4-202ENST00000357388 MIEF1Q9NQG6 463 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 ABCB10Q9NRK6 738 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 CHORDC1Q9UHD1 332 aaPredicted RBP13.1□□□□□ -0.31
SMC4-202ENST00000357388 PRR36Q9H6K5 1346 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 PLA2G6O60733 806 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 VDRP11473 427 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 PDIA6Q15084 440 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 PKN1Q16512 942 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 HERC6Q8IVU3 1022 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 SLC44A2Q8IWA5 706 aaPredicted RBP13.1□□□□□ -0.31
SMC4-202ENST00000357388 KBTBD2Q8IY47 623 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 PROX1Q92786 737 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 PLA2G12BQ9BX93 195 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 CYP4F12Q9HCS2 524 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 PMPCBO75439 489 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 VAV1P15498 845 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 PTDSS1P48651 473 aaKnown RBP13.1□□□□□ -0.31
SMC4-202ENST00000357388 NPY2RP49146 381 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 DDX39BQ13838 428 aaKnown RBP13.1□□□□□ -0.31
SMC4-202ENST00000357388 PLEKHH3Q7Z736 793 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 DAGLBQ8NCG7 672 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 BHLHE22Q8NFJ8 381 aaPredicted RBP13.1□□□□□ -0.31
SMC4-202ENST00000357388 FBXO32Q969P5 355 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 KLHL32Q96NJ5 620 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 JMJD4Q9H9V9 463 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 PRDM16Q9HAZ2 1276 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 PRDM8Q9NQV8 689 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 PCDHB12Q9Y5F1 795 aa13.1□□□□□ -0.31
SMC4-202ENST00000357388 A0A087X1B8 175 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 H3BN98 237 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 SNAP23O00161 211 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 NDUFB5O43674 189 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 CYP1A1P04798 512 aaPredicted RBP13.09□□□□□ -0.31
SMC4-202ENST00000357388 NFICP08651 508 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 GLRBP48167 497 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 OXCT1P55809 520 aa13.09□□□□□ -0.31
SMC4-202ENST00000357388 GNA13Q14344 377 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms