RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 SH2D5Q6ZV89 423 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 JADE3Q92613 823 aa13.95□□□□□ -0.18
TRIM4-203ENST00000355947 A0A096LPK6 155 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 TRMUO75648 421 aaKnown RBP13.94□□□□□ -0.18
TRIM4-203ENST00000355947 CKMT2P17540 419 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 MS4A2Q01362 244 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 PRPSAP1Q14558 356 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 ZNF460Q14592 562 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 ANO4Q32M45 955 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 PNPLA1Q8N8W4 532 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 OR52K1Q8NGK4 314 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 OR6B3Q8NGW1 331 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 PORCNQ9H237 461 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 SLC38A10Q9HBR0 1119 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 PCDH18Q9HCL0 1135 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 COPG2Q9UBF2 871 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 TMCO1Q9UM00 188 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 SNX9Q9Y5X1 595 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 SBF2Q86WG5 1849 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 FAM149AA5PLN7 773 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 OGTO15294 1046 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 AKAP10O43572 662 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 TNFAIP8O95379 198 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 CLIC3O95833 236 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 KCNA2P16389 499 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 NAMPTP43490 491 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 GABRB2P47870 512 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 STAT5BP51692 787 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 IFRD2Q12894 506 aaPredicted RBP13.94□□□□□ -0.18
TRIM4-203ENST00000355947 DCTN2Q13561 401 aaKnown RBP13.94□□□□□ -0.18
TRIM4-203ENST00000355947 TBCCQ15814 346 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 FAM47CQ5HY64 1035 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 TRNP1Q6NT89 227 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 NAPRTQ6XQN6 538 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 KYAT3Q6YP21 454 aaKnown RBP13.94□□□□□ -0.18
TRIM4-203ENST00000355947 TP53INP2Q8IXH6 220 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 SIGLEC10Q96LC7 697 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 WDR41Q9HAD4 459 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 PTPRHQ9HD43 1115 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 SNX15Q9NRS6 342 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 EMCNQ9ULC0 261 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 PSMD13Q9UNM6 376 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 LTBP4Q8N2S1 1624 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 ATP6AP2A0A1C7CYW4 349 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 ATP6AP2O75787 350 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 RGS20O76081 388 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 GOT1P17174 413 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 MAGEA10P43363 369 aaPredicted RBP13.94□□□□□ -0.18
TRIM4-203ENST00000355947 ASPAP45381 313 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 SERPINB8P50452 374 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 SERPINB9P50453 376 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 MYBPC1Q00872 1141 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 DGKDQ16760 1214 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 KLC3Q6P597 504 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 GK5Q6ZS86 529 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 ANKRD23Q86SG2 305 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 WDR49Q8IV35 697 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 CMASQ8NFW8 434 aaPredicted RBP13.94□□□□□ -0.18
TRIM4-203ENST00000355947 TSPAN14Q8NG11 270 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 SLC39A3Q9BRY0 314 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 PAIP1Q9H074 479 aaKnown RBP13.94□□□□□ -0.18
TRIM4-203ENST00000355947 CCDC167Q9P0B6 97 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 TLK1Q9UKI8 766 aa13.94□□□□□ -0.18
TRIM4-203ENST00000355947 GIPC1O14908 333 aa13.93□□□□□ -0.18
TRIM4-203ENST00000355947 GARSP41250 739 aaKnown RBP13.93□□□□□ -0.18
TRIM4-203ENST00000355947 CASP2P42575 452 aa13.93□□□□□ -0.18
TRIM4-203ENST00000355947 RABGGTBP53611 331 aa13.93□□□□□ -0.18
TRIM4-203ENST00000355947 PTK2BQ14289 1009 aa13.93□□□□□ -0.18
TRIM4-203ENST00000355947 SPDYE2Q495Y8 402 aa13.93□□□□□ -0.18
TRIM4-203ENST00000355947 SH3D19Q5HYK7 790 aa13.93□□□□□ -0.18
TRIM4-203ENST00000355947 RNF168Q8IYW5 571 aaPredicted RBP13.93□□□□□ -0.18
TRIM4-203ENST00000355947 NLGN1Q8N2Q7 840 aa13.93□□□□□ -0.18
TRIM4-203ENST00000355947 ZNF513Q8N8E2 541 aaPredicted RBP13.93□□□□□ -0.18
TRIM4-203ENST00000355947 ACTRT2Q8TDY3 377 aa13.93□□□□□ -0.18
TRIM4-203ENST00000355947 TMEM176AQ96HP8 235 aa13.93□□□□□ -0.18
TRIM4-203ENST00000355947 CITO14578 2027 aa13.93□□□□□ -0.18
TRIM4-203ENST00000355947 KLF11O14901 512 aa13.93□□□□□ -0.18
TRIM4-203ENST00000355947 MT-ND1P03886 318 aa13.93□□□□□ -0.18
TRIM4-203ENST00000355947 NAA20P61599 178 aa13.93□□□□□ -0.18
TRIM4-203ENST00000355947 PDAP1Q13442 181 aaKnown RBP13.93□□□□□ -0.18
TRIM4-203ENST00000355947 CDKL3Q8IVW4 592 aaPredicted RBP13.93□□□□□ -0.18
TRIM4-203ENST00000355947 LRTOMTQ8WZ04 291 aa13.93□□□□□ -0.18
TRIM4-203ENST00000355947 HAPLN3Q96S86 360 aa13.93□□□□□ -0.18
TRIM4-203ENST00000355947 ZNF518BQ9C0D4 1074 aa13.93□□□□□ -0.18
TRIM4-203ENST00000355947 IARS2Q9NSE4 1012 aaKnown RBP13.93□□□□□ -0.18
TRIM4-203ENST00000355947 NRBP2Q9NSY0 501 aa13.93□□□□□ -0.18
TRIM4-203ENST00000355947 HESX1Q9UBX0 185 aa13.93□□□□□ -0.18
TRIM4-203ENST00000355947 WDR46O15213 610 aaKnown RBP13.92□□□□□ -0.18
TRIM4-203ENST00000355947 SNNO75324 88 aaPredicted RBP13.92□□□□□ -0.18
TRIM4-203ENST00000355947 SMIM18P0DKX4 95 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 CDK4P11802 303 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 ENTPD1P49961 510 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 SLC10A2Q12908 348 aaPredicted RBP13.92□□□□□ -0.18
TRIM4-203ENST00000355947 ATF7IP2Q5U623 682 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 IL23RQ5VWK5 629 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 PPP1R2P3Q6NXS1 205 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 NAT16Q8N8M0 369 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 SLC4A11Q8NBS3 891 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 HPDLQ96IR7 371 aa13.92□□□□□ -0.18
TRIM4-203ENST00000355947 GJD4Q96KN9 370 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms