RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 MAN1A2O60476 641 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 CST8O60676 142 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 TUBB4AP04350 444 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 PDGFRBP09619 1106 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 TMEM191BP0C7N4 346 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 UBA1P22314 1058 aaKnown RBP5.83□□□□□ -1.48
CD47-201ENST00000355354 EPHA3P29320 983 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 ELF1P32519 619 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 RFC2P35250 354 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 GPD2P43304 727 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 STT3AP46977 705 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 ERVK-21P61565 698 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 GTF2BQ00403 316 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 CFAP221Q4G0U5 840 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 SETMARQ53H47 684 aaPredicted RBP5.83□□□□□ -1.48
CD47-201ENST00000355354 PPP1R26Q5T8A7 1209 aaPredicted RBP5.83□□□□□ -1.48
CD47-201ENST00000355354 ARMC12Q5T9G4 340 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 CNNM4Q6P4Q7 775 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 DNAJC14Q6Y2X3 702 aaPredicted RBP5.83□□□□□ -1.48
CD47-201ENST00000355354 TMEM184AQ6ZMB5 413 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 LIMS2Q7Z4I7 341 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 FAM35AQ86V20 835 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 RETREG3Q86VR2 466 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 RBAKQ9NYW8 714 aaPredicted RBP5.83□□□□□ -1.48
CD47-201ENST00000355354 RNF11Q9Y3C5 154 aa5.83□□□□□ -1.48
CD47-201ENST00000355354 SYNJ2BP-COX16A0A087WUM0 186 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 A0A087WUV0 522 aaPredicted RBP5.82□□□□□ -1.48
CD47-201ENST00000355354 LCHNA4D1U4 455 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 PDLIM1O00151 329 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 PKNOX1P55347 436 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 TIAL1Q01085 375 aaKnown RBP eCLIP5.82□□□□□ -1.48
CD47-201ENST00000355354 GRIK3Q13003 919 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 ELMSAN1Q6PJG2 1045 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 MTERF4Q7Z6M4 381 aaKnown RBP5.82□□□□□ -1.48
CD47-201ENST00000355354 TMEM151BQ8IW70 566 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 ZBED8Q8IZ13 594 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 NAT8LQ8N9F0 302 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 SGF29Q96ES7 293 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 STK33Q9BYT3 514 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 OSBPL8Q9BZF1 889 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 DCLK3Q9C098 648 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 OSBPL2Q9H1P3 480 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 IKZF5Q9H5V7 419 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 VTA1Q9NP79 307 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 TYW1Q9NV66 732 aaKnown RBP5.82□□□□□ -1.48
CD47-201ENST00000355354 COX16Q9P0S2 106 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 CAPN8A6NHC0 703 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 TNFRSF10AO00220 468 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 EBAG9O00559 213 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 SMNDC1O75940 238 aaKnown RBP eCLIP5.82□□□□□ -1.48
CD47-201ENST00000355354 CSPG5O95196 566 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 EYA4O95677 639 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 NR3C2P08235 984 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 OR4Q2P0C623 313 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 TCN1P20061 433 aaPredicted RBP5.82□□□□□ -1.48
CD47-201ENST00000355354 MIPP30301 263 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 DGKEP52429 567 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 SF1Q15637 639 aaKnown RBP5.82□□□□□ -1.48
CD47-201ENST00000355354 KIZQ2M2Z5 673 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 GLIPR1L2Q4G1C9 344 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 ASPRV1Q53RT3 343 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 FAM102BQ5T8I3 360 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 TBPL2Q6SJ96 375 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 FAM131BQ86XD5 332 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 TTC16Q8NEE8 873 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 DNERQ8NFT8 737 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 PPP4R1Q8TF05 950 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 SIGLEC10Q96LC7 697 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 AGO3Q9H9G7 860 aaKnown RBP5.82□□□□□ -1.48
CD47-201ENST00000355354 DOLKQ9UPQ8 538 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 SNX13Q9Y5W8 968 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 FN1P02751 2386 aaKnown RBP5.82□□□□□ -1.48
CD47-201ENST00000355354 GAS7O60861 476 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 TXNP10599 105 aaKnown RBP5.82□□□□□ -1.48
CD47-201ENST00000355354 MYOGP15173 224 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 CSF2RAP15509 400 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 TCP1P17987 556 aaKnown RBP5.82□□□□□ -1.48
CD47-201ENST00000355354 ASPAP45381 313 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 PSMC1P62191 440 aaKnown RBP5.82□□□□□ -1.48
CD47-201ENST00000355354 GPS1Q13098 491 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 SLC9A4Q6AI14 798 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 EMBQ6PCB8 327 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 ABHD15Q6UXT9 468 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 CEP97Q8IW35 865 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 UBR7Q8N806 425 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 SLC4A11Q8NBS3 891 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 CUL5Q93034 780 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 CHMP6Q96FZ7 201 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 NECTIN4Q96NY8 510 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 POLR3CQ9BUI4 534 aaPredicted RBP5.82□□□□□ -1.48
CD47-201ENST00000355354 ABCG8Q9H221 673 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 XPNPEP3Q9NQH7 507 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 CISHQ9NSE2 258 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 OSER1Q9NX31 292 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 A0A0G2JND7 137 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 WASHC1A8K0Z3 465 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 GRXCR1A8MXD5 290 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 LOC730098B7Z3J9 87 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 H0Y858 1186 aa5.82□□□□□ -1.48
CD47-201ENST00000355354 TRIM24O15164 1050 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms