RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 SYNJ2BP-COX16A0A087WUM0 186 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 DRGXA6NNA5 263 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 LILRB3O75022 631 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 CCNCP24863 283 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 NRLP54845 237 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 FRG1Q14331 258 aaKnown RBP17.71■□□□□ 0.43
VPS13B-201ENST00000355155 TADA2BQ86TJ2 420 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 ZBED8Q8IZ13 594 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 FBXO32Q969P5 355 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 B3GALT6Q96L58 329 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 PRMT1Q99873 361 aaKnown RBP17.71■□□□□ 0.43
VPS13B-201ENST00000355155 CCDC134Q9H6E4 229 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 IL23AQ9NPF7 189 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 COX16Q9P0S2 106 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 HS3ST4Q9Y661 456 aa17.71■□□□□ 0.43
VPS13B-201ENST00000355155 ERI2A8K979 691 aaKnown RBP17.71■□□□□ 0.42
VPS13B-201ENST00000355155 NT5C1B-RDH14C9J2C7 533 aa17.71■□□□□ 0.42
VPS13B-201ENST00000355155 LINC00271P0C7V0 271 aa17.71■□□□□ 0.42
VPS13B-201ENST00000355155 IFNAR2P48551 515 aa17.71■□□□□ 0.42
VPS13B-201ENST00000355155 IFI35P80217 286 aaPredicted RBP17.71■□□□□ 0.42
VPS13B-201ENST00000355155 CREMQ03060 361 aa17.71■□□□□ 0.42
VPS13B-201ENST00000355155 STEAP4Q687X5 459 aa17.71■□□□□ 0.42
VPS13B-201ENST00000355155 ZNF449Q6P9G9 518 aa17.71■□□□□ 0.42
VPS13B-201ENST00000355155 AGGF1Q8N302 714 aaeCLIP17.71■□□□□ 0.422e-7■■□□□ 13.7
VPS13B-201ENST00000355155 LGMNQ99538 433 aa17.71■□□□□ 0.42
VPS13B-201ENST00000355155 RXFP1Q9HBX9 757 aa17.71■□□□□ 0.42
VPS13B-201ENST00000355155 DONSONQ9NYP3 566 aa17.71■□□□□ 0.42
VPS13B-201ENST00000355155 CDY1Q9Y6F8 540 aa17.71■□□□□ 0.42
VPS13B-201ENST00000355155 NYNRINQ9P2P1 1898 aaKnown RBP17.7■□□□□ 0.42
VPS13B-201ENST00000355155 RNF103O00237 685 aa17.7■□□□□ 0.42
VPS13B-201ENST00000355155 TRDMT1O14717 391 aaKnown RBP17.7■□□□□ 0.42
VPS13B-201ENST00000355155 PTPN3P26045 913 aa17.7■□□□□ 0.42
VPS13B-201ENST00000355155 PPP3CCP48454 512 aa17.7■□□□□ 0.42
VPS13B-201ENST00000355155 IRAK1P51617 712 aa17.7■□□□□ 0.42
VPS13B-201ENST00000355155 KLHL38Q2WGJ6 581 aa17.7■□□□□ 0.42
VPS13B-201ENST00000355155 RASIP1Q5U651 963 aa17.7■□□□□ 0.42
VPS13B-201ENST00000355155 LRRC8BQ6P9F7 803 aa17.7■□□□□ 0.42
VPS13B-201ENST00000355155 PRSS55Q6UWB4 352 aaPredicted RBP17.7■□□□□ 0.42
VPS13B-201ENST00000355155 CCDC13Q8IYE1 715 aa17.7■□□□□ 0.42
VPS13B-201ENST00000355155 ZNF461Q8TAF7 563 aa17.7■□□□□ 0.42
VPS13B-201ENST00000355155 PYROXD1Q8WU10 500 aa17.7■□□□□ 0.42
VPS13B-201ENST00000355155 SSU72Q9NP77 194 aaKnown RBP17.7■□□□□ 0.42
VPS13B-201ENST00000355155 SFMBT1Q9UHJ3 866 aa17.7■□□□□ 0.42
VPS13B-201ENST00000355155 OBSL1O75147 1896 aa17.7■□□□□ 0.42
VPS13B-201ENST00000355155 TBX4P57082 545 aa17.7■□□□□ 0.42
VPS13B-201ENST00000355155 DMTNQ08495 405 aa17.7■□□□□ 0.42
VPS13B-201ENST00000355155 KCTD11Q693B1 232 aa17.7■□□□□ 0.42
VPS13B-201ENST00000355155 ARHGEF18Q6ZSZ5 1173 aa17.7■□□□□ 0.42
VPS13B-201ENST00000355155 TAOK1Q7L7X3 1001 aa17.7■□□□□ 0.42
VPS13B-201ENST00000355155 ZNF567Q8N184 647 aa17.7■□□□□ 0.42
VPS13B-201ENST00000355155 RTL3Q8N8U3 475 aaKnown RBP17.7■□□□□ 0.42
VPS13B-201ENST00000355155 PGLYRP2Q96PD5 576 aa17.7■□□□□ 0.42
VPS13B-201ENST00000355155 GORASP1Q9BQQ3 440 aa17.7■□□□□ 0.42
VPS13B-201ENST00000355155 SPG21Q9NZD8 308 aa17.7■□□□□ 0.42
VPS13B-201ENST00000355155 ADAM12O43184 909 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 MYCP01106 439 aaPredicted RBP17.69■□□□□ 0.42
VPS13B-201ENST00000355155 PPM1AP35813 382 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 TAF10Q12962 218 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 EXOC3L1Q86VI1 746 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 ATP6V0D2Q8N8Y2 350 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 FBXO36Q8NEA4 188 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 BTN2A3PQ96KV6 586 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 SIGLEC10Q96LC7 697 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 DNAJC17Q9NVM6 304 aaKnown RBP17.69■□□□□ 0.42
VPS13B-201ENST00000355155 ZNF212Q9UDV6 495 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 MRPL42Q9Y6G3 142 aaKnown RBP17.69■□□□□ 0.42
VPS13B-201ENST00000355155 CHD5Q8TDI0 1954 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 EPHB2P29323 1055 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 NDST2P52849 883 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 DEFB103AP81534 67 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 DUSP4Q13115 394 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 LONRF1Q17RB8 773 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 PIK3R6Q5UE93 754 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 ADGRD1Q6QNK2 874 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 CCNJLQ8IV13 435 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 UMODL1-AS1Q8N2C9 162 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 PPP1R2P1Q96PQ5 205 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 GBA3Q9H227 469 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.69■□□□□ 0.42
VPS13B-201ENST00000355155 TMEM248Q9NWD8 314 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 SENP1Q9P0U3 644 aa17.69■□□□□ 0.42
VPS13B-201ENST00000355155 E9PAM4 449 aa17.68■□□□□ 0.42
VPS13B-201ENST00000355155 RHOQP17081 205 aa17.68■□□□□ 0.42
VPS13B-201ENST00000355155 HMGA1P17096 107 aaKnown RBP17.68■□□□□ 0.42
VPS13B-201ENST00000355155 PRKCHP24723 683 aa17.68■□□□□ 0.42
VPS13B-201ENST00000355155 SARNPP82979 210 aaKnown RBP17.68■□□□□ 0.42
VPS13B-201ENST00000355155 MGAT5BQ3V5L5 792 aa17.68■□□□□ 0.42
VPS13B-201ENST00000355155 SDHAF4Q5VUM1 108 aa17.68■□□□□ 0.42
VPS13B-201ENST00000355155 IL12RB2Q99665 862 aa17.68■□□□□ 0.42
VPS13B-201ENST00000355155 PLAC1Q9HBJ0 212 aa17.68■□□□□ 0.42
VPS13B-201ENST00000355155 PSMD3O43242 534 aa17.68■□□□□ 0.42
VPS13B-201ENST00000355155 ATP2A2P16615 1042 aaKnown RBP17.68■□□□□ 0.42
VPS13B-201ENST00000355155 PBX3P40426 434 aa17.68■□□□□ 0.42
VPS13B-201ENST00000355155 B4GALNT4Q76KP1 1039 aa17.68■□□□□ 0.42
VPS13B-201ENST00000355155 SNX10Q9Y5X0 201 aa17.68■□□□□ 0.42
VPS13B-201ENST00000355155 CSH1P0DML2 217 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 CSH2P0DML3 217 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 CSF2RAP15509 400 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 TEX44Q53QW1 395 aa17.67■□□□□ 0.42
VPS13B-201ENST00000355155 SP7Q8TDD2 431 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms