RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 PPP1R36Q96LQ0 422 aa20.08■□□□□ 0.81
COL13A1-201ENST00000354547 PIGVQ9NUD9 493 aa20.08■□□□□ 0.81
COL13A1-201ENST00000354547 KIF1CO43896 1103 aaKnown RBP20.08■□□□□ 0.8
COL13A1-201ENST00000354547 SORBS2O94875 1100 aaKnown RBP20.08■□□□□ 0.8
COL13A1-201ENST00000354547 DEUP1Q05D60 604 aa20.08■□□□□ 0.8
COL13A1-201ENST00000354547 NIPAL4Q0D2K0 466 aa20.08■□□□□ 0.8
COL13A1-201ENST00000354547 WASHC5Q12768 1159 aa20.08■□□□□ 0.8
COL13A1-201ENST00000354547 PCLAFQ15004 111 aa20.08■□□□□ 0.8
COL13A1-201ENST00000354547 KYAT3Q6YP21 454 aaKnown RBP20.08■□□□□ 0.8
COL13A1-201ENST00000354547 CRYBG2Q8N1P7 616 aa20.08■□□□□ 0.8
COL13A1-201ENST00000354547 RNF169Q8NCN4 708 aa20.08■□□□□ 0.8
COL13A1-201ENST00000354547 B3GALNT2Q8NCR0 500 aa20.08■□□□□ 0.8
COL13A1-201ENST00000354547 ZNF669Q96BR6 464 aaPredicted RBP20.08■□□□□ 0.8
COL13A1-201ENST00000354547 CCDC124Q96CT7 223 aaKnown RBP20.08■□□□□ 0.8
COL13A1-201ENST00000354547 FCRL3Q96P31 734 aaPredicted RBP20.08■□□□□ 0.8
COL13A1-201ENST00000354547 AGAP2Q99490 1192 aa20.08■□□□□ 0.8
COL13A1-201ENST00000354547 SGIP1Q9BQI5 828 aa20.08■□□□□ 0.8
COL13A1-201ENST00000354547 OXCT2Q9BYC2 517 aaPredicted RBP20.08■□□□□ 0.8
COL13A1-201ENST00000354547 MAN1C1Q9NR34 630 aa20.08■□□□□ 0.8
COL13A1-201ENST00000354547 APOBEC2Q9Y235 224 aaKnown RBP20.08■□□□□ 0.8
COL13A1-201ENST00000354547 ZMPSTE24O75844 475 aa20.08■□□□□ 0.8
COL13A1-201ENST00000354547 PGAM1P18669 254 aa20.08■□□□□ 0.8
COL13A1-201ENST00000354547 ARRB2P32121 409 aa20.08■□□□□ 0.8
COL13A1-201ENST00000354547 DLG2Q15700 870 aa20.08■□□□□ 0.8
COL13A1-201ENST00000354547 RALGPS1Q5JS13 557 aa20.08■□□□□ 0.8
COL13A1-201ENST00000354547 MARK2Q7KZI7 788 aaKnown RBP20.08■□□□□ 0.8
COL13A1-201ENST00000354547 STRADAQ7RTN6 431 aa20.08■□□□□ 0.8
COL13A1-201ENST00000354547 SIX6OS1Q8N1H7 587 aa20.08■□□□□ 0.8
COL13A1-201ENST00000354547 PPFIBP2Q8ND30 876 aa20.08■□□□□ 0.8
COL13A1-201ENST00000354547 SH3TC2Q8TF17 1288 aa20.08■□□□□ 0.8
COL13A1-201ENST00000354547 DLGAP2Q9P1A6 1054 aa20.08■□□□□ 0.8
COL13A1-201ENST00000354547 SNX10Q9Y5X0 201 aa20.08■□□□□ 0.8
COL13A1-201ENST00000354547 NUP205Q92621 2012 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 GLRA3O75311 464 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 AMHP03971 560 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 SERPINA6P08185 405 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 TPH1P17752 444 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 ACADSBP45954 432 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 TAF6P49848 677 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 KLC1Q07866 573 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 DPY19L2Q6NUT2 758 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 GSTCDQ8NEC7 633 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 ZFP42Q96MM3 310 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 SYT15Q9BQS2 421 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 KATNBL1Q9H079 304 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 MKS1Q9NXB0 559 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 PIRO00625 290 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 SMIM10L2AP0DMW4 78 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 SMIM10L2BP0DMW5 78 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 ACADSP16219 412 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 USP4Q13107 963 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 LRRC36Q1X8D7 754 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 C6orf163Q5TEZ5 329 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 OTUD1Q5VV17 481 aaPredicted RBP20.07■□□□□ 0.8
COL13A1-201ENST00000354547 WSCD1Q658N2 575 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 PLD6Q8N2A8 252 aaKnown RBP20.07■□□□□ 0.8
COL13A1-201ENST00000354547 PPP4R1Q8TF05 950 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 APBB2Q92870 758 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 STX18Q9P2W9 335 aaKnown RBP20.07■□□□□ 0.8
COL13A1-201ENST00000354547 CORO1CQ9ULV4 474 aaPredicted RBP20.07■□□□□ 0.8
COL13A1-201ENST00000354547 DERAQ9Y315 318 aa20.07■□□□□ 0.8
COL13A1-201ENST00000354547 POLBP06746 335 aa20.06■□□□□ 0.8
COL13A1-201ENST00000354547 LINGO3P0C6S8 592 aa20.06■□□□□ 0.8
COL13A1-201ENST00000354547 HIC1Q14526 733 aa20.06■□□□□ 0.8
COL13A1-201ENST00000354547 ARCQ7LC44 396 aa20.06■□□□□ 0.8
COL13A1-201ENST00000354547 KBTBD2Q8IY47 623 aa20.06■□□□□ 0.8
COL13A1-201ENST00000354547 ARRDC4Q8NCT1 418 aa20.06■□□□□ 0.8
COL13A1-201ENST00000354547 ANKRD27Q96NW4 1050 aa20.06■□□□□ 0.8
COL13A1-201ENST00000354547 FERMT1Q9BQL6 677 aa20.06■□□□□ 0.8
COL13A1-201ENST00000354547 MMADHCQ9H3L0 296 aaPredicted RBP20.06■□□□□ 0.8
COL13A1-201ENST00000354547 CPSF2Q9P2I0 782 aaKnown RBP20.06■□□□□ 0.8
COL13A1-201ENST00000354547 NRP1O14786 923 aa20.06■□□□□ 0.8
COL13A1-201ENST00000354547 MAP3K7O43318 606 aa20.06■□□□□ 0.8
COL13A1-201ENST00000354547 OPHN1O60890 802 aa20.06■□□□□ 0.8
COL13A1-201ENST00000354547 PDE5AO76074 875 aa20.06■□□□□ 0.8
COL13A1-201ENST00000354547 ALDH1A2O94788 518 aa20.06■□□□□ 0.8
COL13A1-201ENST00000354547 DARSP14868 501 aaKnown RBP20.06■□□□□ 0.8
COL13A1-201ENST00000354547 TKTL1P51854 596 aa20.06■□□□□ 0.8
COL13A1-201ENST00000354547 PDK1Q15118 436 aa20.06■□□□□ 0.8
COL13A1-201ENST00000354547 STEAP4Q687X5 459 aa20.06■□□□□ 0.8
COL13A1-201ENST00000354547 ALKAL1Q6UXT8 129 aa20.06■□□□□ 0.8
COL13A1-201ENST00000354547 TIFABQ6ZNK6 161 aa20.06■□□□□ 0.8
COL13A1-201ENST00000354547 DCLK2Q8N568 766 aa20.06■□□□□ 0.8
COL13A1-201ENST00000354547 SHCBP1Q8NEM2 672 aa20.06■□□□□ 0.8
COL13A1-201ENST00000354547 HSFY1Q96LI6 401 aa20.06■□□□□ 0.8
COL13A1-201ENST00000354547 G3BP2Q9UN86 482 aaKnown RBP20.06■□□□□ 0.8
COL13A1-201ENST00000354547 TM7SF2O76062 418 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 LILRA4P59901 499 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 DUSP28Q4G0W2 176 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 HSP90AA5PQ58FG0 334 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 MAVSQ7Z434 540 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 STRA8Q7Z7C7 330 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 CERS2Q96G23 380 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 ANLNQ9NQW6 1124 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 PLA2G4CQ9UP65 541 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 ENO4A6NNW6 628 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 HACD1B0YJ81 288 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 RALBP11234 206 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 CNTFP26441 200 aa20.05■□□□□ 0.8
COL13A1-201ENST00000354547 CERCAMQ5T4B2 595 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms