RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 SPANXN2Q5MJ10 180 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 PAPD7Q5XG87 772 aaKnown RBP11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 ERICH5Q6P6B1 374 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 DHDDSQ86SQ9 333 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 ADGRF2Q8IZF7 708 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 RDM1Q8NG50 284 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 HSPBAP1Q96EW2 488 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 TSPAN17Q96FV3 270 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 TUBA1CQ9BQE3 449 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 MKNK1Q9BUB5 465 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 ERVK-11Q9UQG0 969 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 A0A1W2PQJ5 194 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 A8MUI8 341 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 AIM2O14862 343 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 PABPC1P11940 636 aaKnown RBP11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 SREBF1P36956 1147 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 GDI2P50395 445 aaKnown RBP11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 TOB1P50616 345 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 DMC1Q14565 340 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 TRIM71Q2Q1W2 868 aaKnown RBP11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 TRIQKQ629K1 86 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 CARNMT1Q8N4J0 409 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 DNAJC5Q9H3Z4 198 aa11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 AGO4Q9HCK5 861 aaKnown RBP11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 TIMM13Q9Y5L4 95 aaPredicted RBP11.33□□□□□ -0.6
SMARCE1-202ENST00000348513 RIMS1Q86UR5 1692 aaKnown RBP11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 PDHXO00330 501 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 DBTP11182 482 aaKnown RBP11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 NAT2P11245 290 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 ITIH1P19827 911 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 WEE1P30291 646 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 PTGER2P43116 358 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 RAB25P57735 213 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 ZNF484Q5JVG2 852 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 PDZK1Q5T2W1 519 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 KRT74Q7RTS7 529 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 CYP2U1Q7Z449 544 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 FBXO32Q969P5 355 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 TMEM120AQ9BXJ8 343 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 MTFR1LQ9H019 292 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 CAPN10Q9HC96 672 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 AVENQ9NQS1 362 aaPredicted RBP11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 ZFP1Q6P2D0 407 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 GALNT7Q86SF2 657 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 KBTBD2Q8IY47 623 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 DNAJC1Q96KC8 554 aaKnown RBP11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 TMX2Q9Y320 296 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 LMTK2Q8IWU2 1503 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 SARSP49591 514 aaKnown RBP11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 MAPK10P53779 464 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 SNRPFP62306 86 aaKnown RBP11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 CTC1Q2NKJ3 1217 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 PHC2Q8IXK0 858 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 YME1L1Q96TA2 773 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 C15orf38-AP3S2A0A0A6YYH1 394 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 TMEM150BA6NC51 233 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 CPA3P15088 417 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 ZNF177Q13360 481 aaPredicted RBP11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 QPRTQ15274 297 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 ARPINQ7Z6K5 226 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 ZNF677Q86XU0 584 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 C12orf50Q8NA57 414 aaPredicted RBP11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 CENPOQ9BU64 300 aa11.32□□□□□ -0.6
SMARCE1-202ENST00000348513 POMCP01189 267 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 MZF1P28698 734 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 COILP38432 576 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 CTXN3Q4LDR2 81 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 MEI1Q5TIA1 1274 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 SHQ1Q6PI26 577 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 ATP6V0D2Q8N8Y2 350 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 SPERTQ8NA61 448 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 USP38Q8NB14 1042 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 WDR48Q8TAF3 677 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 PPP1R13LQ8WUF5 828 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 FUCA2Q9BTY2 467 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 CRLS1Q9UJA2 301 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 ABCG2Q9UNQ0 655 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 V9GYQ6 96 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 ITSN1Q15811 1721 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 DCDC2CA8MYV0 355 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 C5orf58C9J3I9 102 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 SEC24AO95486 1093 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 CXCL8P10145 99 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 TNFRSF8P28908 595 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 EFEMP1Q12805 493 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 PTPAQ15257 358 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 ZNF284Q2VY69 593 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 POLNQ7Z5Q5 900 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 CYP2W1Q8TAV3 490 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 EPS8L3Q8TE67 593 aaKnown RBP11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 USP13Q92995 863 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 GLIS2Q9BZE0 524 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 MROH8Q9H579 483 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 POLR3BQ9NW08 1133 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 DUSP10Q9Y6W6 482 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 NCF1BA6NI72 391 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 NCF1CA8MVU1 366 aaPredicted RBP11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 MYO1GB0I1T2 1018 aa11.31□□□□□ -0.6
SMARCE1-202ENST00000348513 CENPBD1B2RD01 187 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms