RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 PPP1R2P3Q6NXS1 205 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 EPGNQ6UW88 154 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 CYP2R1Q6VVX0 501 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 TDRD5Q8NAT2 981 aaKnown RBP15.72■□□□□ 0.11
LMNA-201ENST00000347559 EBNA1BP2Q99848 306 aaKnown RBP15.72■□□□□ 0.11
LMNA-201ENST00000347559 OSBPL11Q9BXB4 747 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 RAB6CQ9H0N0 254 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 CDY2AQ9Y6F7 541 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 CDY1Q9Y6F8 540 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 G3V3G9 751 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 OXSR1O95747 527 aaPredicted RBP15.72■□□□□ 0.11
LMNA-201ENST00000347559 ACADVLP49748 655 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 TXNL4AP83876 142 aaKnown RBP15.72■□□□□ 0.11
LMNA-201ENST00000347559 TAP1Q03518 808 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 ORC1Q13415 861 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 NR1D2Q14995 579 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 DCAF8Q5TAQ9 597 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 DENND1BQ6P3S1 775 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 TTC33Q6PID6 262 aaPredicted RBP15.72■□□□□ 0.11
LMNA-201ENST00000347559 SLC2A7Q6PXP3 512 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 CMC1Q7Z7K0 106 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 TMEM126BQ8IUX1 230 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 NIPA2Q8N8Q9 360 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 NOL11Q9H8H0 719 aaKnown RBP15.72■□□□□ 0.11
LMNA-201ENST00000347559 CXorf21Q9HAI6 301 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 GPATCH2LQ9NWQ4 482 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 USP18Q9UMW8 372 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 MRPL11Q9Y3B7 192 aaKnown RBP15.72■□□□□ 0.11
LMNA-201ENST00000347559 FAM32AQ9Y421 112 aaKnown RBP15.72■□□□□ 0.11
LMNA-201ENST00000347559 PSAT1Q9Y617 370 aa15.72■□□□□ 0.11
LMNA-201ENST00000347559 WDR27A2RRH5 827 aa15.71■□□□□ 0.11
LMNA-201ENST00000347559 ITGBL1O95965 494 aaPredicted RBP15.71■□□□□ 0.11
LMNA-201ENST00000347559 CYP2A13Q16696 494 aa15.71■□□□□ 0.11
LMNA-201ENST00000347559 NAPRTQ6XQN6 538 aa15.71■□□□□ 0.11
LMNA-201ENST00000347559 SETD3Q86TU7 594 aaPredicted RBP15.71■□□□□ 0.11
LMNA-201ENST00000347559 PCDH20Q8N6Y1 951 aaKnown RBP15.71■□□□□ 0.11
LMNA-201ENST00000347559 NAA50Q9GZZ1 169 aaKnown RBP15.71■□□□□ 0.11
LMNA-201ENST00000347559 VPS45Q9NRW7 570 aa15.71■□□□□ 0.11
LMNA-201ENST00000347559 CST3P01034 146 aaPredicted RBP15.71■□□□□ 0.11
LMNA-201ENST00000347559 MYCLP12524 364 aaPredicted RBP15.71■□□□□ 0.11
LMNA-201ENST00000347559 ZNF12P17014 697 aa15.71■□□□□ 0.11
LMNA-201ENST00000347559 CCR10P46092 362 aa15.71■□□□□ 0.11
LMNA-201ENST00000347559 IGBP1P78318 339 aa15.71■□□□□ 0.11
LMNA-201ENST00000347559 MTMR1Q13613 665 aa15.71■□□□□ 0.11
LMNA-201ENST00000347559 EML3Q32P44 896 aa15.71■□□□□ 0.11
LMNA-201ENST00000347559 TMEM214Q6NUQ4 689 aaKnown RBP15.71■□□□□ 0.11
LMNA-201ENST00000347559 SCYL2Q6P3W7 929 aa15.71■□□□□ 0.11
LMNA-201ENST00000347559 TMEM26Q6ZUK4 368 aa15.71■□□□□ 0.11
LMNA-201ENST00000347559 TMEM110Q86TL2 294 aa15.71■□□□□ 0.11
LMNA-201ENST00000347559 CARM1Q86X55 608 aa15.71■□□□□ 0.11
LMNA-201ENST00000347559 ACER1Q8TDN7 264 aa15.71■□□□□ 0.11
LMNA-201ENST00000347559 DLG3Q92796 817 aa15.71■□□□□ 0.11
LMNA-201ENST00000347559 SIGLEC10Q96LC7 697 aa15.71■□□□□ 0.11
LMNA-201ENST00000347559 HIPK3Q9H422 1215 aa15.71■□□□□ 0.11
LMNA-201ENST00000347559 RSAD1Q9HA92 442 aa15.71■□□□□ 0.11
LMNA-201ENST00000347559 FBXO28Q9NVF7 368 aa15.71■□□□□ 0.11
LMNA-201ENST00000347559 DCDC2Q9UHG0 476 aa15.71■□□□□ 0.11
LMNA-201ENST00000347559 BCAS2O75934 225 aaPredicted RBP15.7■□□□□ 0.1
LMNA-201ENST00000347559 GARTP22102 1010 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 CREB5Q02930 508 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 GNA12Q03113 381 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 PTK2BQ14289 1009 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 ZBTB49Q6ZSB9 765 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 SH3BP5LQ7L8J4 393 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 DPH6Q7L8W6 267 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 HACE1Q8IYU2 909 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 TBC1D15Q8TC07 691 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 TXNDC16Q9P2K2 825 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 NR2E3Q9Y5X4 410 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 GPC6Q9Y625 555 aaPredicted RBP15.7■□□□□ 0.1
LMNA-201ENST00000347559 GNAO1P09471 354 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 MX2P20592 715 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 MPSTP25325 297 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 ABCG1P45844 678 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 CLCN2P51788 898 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 SESN2P58004 480 aaPredicted RBP15.7■□□□□ 0.1
LMNA-201ENST00000347559 SPIDRQ14159 915 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 TKFCQ3LXA3 575 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 LSM12Q3MHD2 195 aaKnown RBP15.7■□□□□ 0.1
LMNA-201ENST00000347559 ZBED5Q49AG3 693 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 AARS2Q5JTZ9 985 aaKnown RBP15.7■□□□□ 0.1
LMNA-201ENST00000347559 ZNF597Q96LX8 424 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 ACO2Q99798 780 aaKnown RBP15.7■□□□□ 0.1
LMNA-201ENST00000347559 SLC8A2Q9UPR5 921 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.7■□□□□ 0.1
LMNA-201ENST00000347559 VAPBO95292 243 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 METTL18O95568 372 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 CHRNGP07510 517 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 HARS2P49590 506 aaKnown RBP15.7■□□□□ 0.1
LMNA-201ENST00000347559 BMXP51813 675 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 TRAF2Q12933 501 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 NME3Q13232 169 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 CES3Q6UWW8 571 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 LDHDQ86WU2 507 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 AGO4Q9HCK5 861 aaKnown RBP15.7■□□□□ 0.1
LMNA-201ENST00000347559 CYP26B1Q9NR63 512 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 CISHQ9NSE2 258 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 COL20A1Q9P218 1284 aa15.7■□□□□ 0.1
LMNA-201ENST00000347559 FOCADQ5VW36 1801 aa15.69■□□□□ 0.1
LMNA-201ENST00000347559 A0A087WXM4 84 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms