RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 LRRC53A6NM62 1247 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 WASH3PC4AMC7 463 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 DCLK1O15075 740 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 NDUFS2O75306 463 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 PAGE1O75459 146 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 EPN2O95208 641 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 CHRM1P11229 460 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 UNGP13051 313 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 CD70P32970 193 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 FLT3P36888 993 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 DHPSP49366 369 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 CREB5Q02930 508 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 SULT2A1Q06520 285 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 C1QBPQ07021 282 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 SFSWAPQ12872 951 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 LMAN2Q12907 356 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 AUHQ13825 339 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 NR1I3Q14994 352 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 CSRP2Q16527 193 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 SPDYCQ5MJ68 293 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 DNAJC24Q6P3W2 148 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 KIAA0907Q7Z7F0 614 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 ADIPOR2Q86V24 386 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 VPS36Q86VN1 386 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 PHF13Q86YI8 300 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 CCAR2Q8N163 923 aaKnown RBP16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 RLN3Q8WXF3 142 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 SORCS1Q8WY21 1168 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 NT5C3BQ969T7 300 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 SIPA1Q96FS4 1042 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 P2RY11Q96G91 374 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 NAP1L5Q96NT1 182 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 DUSP15Q9H1R2 295 aaPredicted RBP16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 ARRDC1-AS1Q9H2J1 176 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 SEMA4GQ9NTN9 838 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 PIGVQ9NUD9 493 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 TMEM59LQ9UK28 342 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 HCN2Q9UL51 889 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 VANGL2Q9ULK5 521 aa16.28■□□□□ 0.2
TSPAN4-201ENST00000346501 OTOGLQ3ZCN5 2332 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 RNASEH1O60930 286 aaKnown RBP16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 CLDN11O75508 207 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 NDUFV2P19404 249 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 CSKP41240 450 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 ATP11AP98196 1134 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 KLHL30Q0D2K2 578 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 ENPP2Q13822 863 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 FUT11Q495W5 492 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 FIGNQ5HY92 759 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 PITRM1Q5JRX3 1037 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 PMS2CLQ68D20 193 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 TMEM215Q68D42 235 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 RNF43Q68DV7 783 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 ACAD10Q6JQN1 1059 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 KIAA1211LQ6NV74 962 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 FBXL22Q6P050 247 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 CYP2U1Q7Z449 544 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 TMPRSS6Q8IU80 811 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 CYB5D2Q8WUJ1 264 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 TTC17Q96AE7 1141 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 MRGPRX1Q96LB2 322 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 CFAP57Q96MR6 1250 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 VPS45Q9NRW7 570 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 ARHGEF38Q9NXL2 777 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 HS3ST4Q9Y661 456 aa16.27■□□□□ 0.2
TSPAN4-201ENST00000346501 SPAG17Q6Q759 2223 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 CBFA2T2O43439 604 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 SRPRAP08240 638 aaKnown RBP16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 OXTRP30559 389 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 MPLP40238 635 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 CDH4P55283 916 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 GSCP56915 257 aaPredicted RBP16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 RPL6Q02878 288 aaKnown RBP16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 CDO1Q16878 200 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 DCUN1D2Q6PH85 259 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 PHLDB2Q86SQ0 1253 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 METTL3Q86U44 580 aaKnown RBP16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 EMC1Q8N766 993 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 KDM1BQ8NB78 822 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 C3orf20Q8ND61 904 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 OR2T3Q8NH03 318 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 WFDC5Q8TCV5 224 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 RXFP2Q8WXD0 754 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 BAP1Q92560 729 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 ERLEC1Q96DZ1 483 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 VCPIP1Q96JH7 1222 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 C1orf74Q96LT6 269 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 HAPLN3Q96S86 360 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 PCDHB18PQ96TA0 734 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 PRMT1Q99873 361 aaKnown RBP16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 TSPY26PQ9H489 355 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 AIPL1Q9NZN9 384 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 CDV3Q9UKY7 258 aaKnown RBP16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 CYP8B1Q9UNU6 501 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 BZW2Q9Y6E2 419 aaKnown RBP16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 GPR179Q6PRD1 2367 aa16.26■□□□□ 0.19
TSPAN4-201ENST00000346501 ADCY5O95622 1261 aa16.25■□□□□ 0.19
TSPAN4-201ENST00000346501 GPD1P21695 349 aa16.25■□□□□ 0.19
TSPAN4-201ENST00000346501 PRKCHP24723 683 aa16.25■□□□□ 0.19
TSPAN4-201ENST00000346501 PTPN9P43378 593 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms