RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 PRUNE1Q86TP1 453 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 PHF13Q86YI8 300 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 SLC9A7Q96T83 725 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 STMN1P16949 149 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 PRKCQQ04759 706 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 IRF5Q13568 498 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 MROH9Q5TGP6 573 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 IL23AQ9NPF7 189 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 TLR9Q9NR96 1032 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 RNF112Q9ULX5 631 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 SYCE1LA8MT33 242 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 CES2O00748 559 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 KATNAL2Q8IYT4 538 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 LACRTQ9GZZ8 138 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 IARS2Q9NSE4 1012 aaKnown RBP16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 AKAP7Q9P0M2 348 aaPredicted RBP16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 AIF1P55008 147 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 LILRA4P59901 499 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 KDSRQ06136 332 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 MFSD4BQ5TF39 518 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 LRRC38Q5VT99 294 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 AGR3Q8TD06 166 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 FAM136AQ96C01 138 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 PRPF18Q99633 342 aaKnown RBP16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 TACO1Q9BSH4 297 aaKnown RBP16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 AARSP49588 968 aaKnown RBP eCLIP16.78■□□□□ 0.283e-6■□□□□ 9.5
SMARCA4-201ENST00000344626 SNX27Q96L92 541 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 SAGE1Q9NXZ1 904 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 CACNG4Q9UBN1 327 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 DCDC2Q9UHG0 476 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 SFMBT1Q9UHJ3 866 aa16.78■□□□□ 0.28
SMARCA4-201ENST00000344626 RGPD2P0DJD1 1756 aa16.77■□□□□ 0.28
SMARCA4-201ENST00000344626 APOC4-APOC2K7ER74 178 aa16.77■□□□□ 0.28
SMARCA4-201ENST00000344626 KCNK1O00180 336 aa16.77■□□□□ 0.28
SMARCA4-201ENST00000344626 FGF18O76093 207 aa16.77■□□□□ 0.28
SMARCA4-201ENST00000344626 APOC2P02655 101 aa16.77■□□□□ 0.28
SMARCA4-201ENST00000344626 MAMLD1Q13495 774 aa16.77■□□□□ 0.28
SMARCA4-201ENST00000344626 BRMS1LQ5PSV4 323 aa16.77■□□□□ 0.28
SMARCA4-201ENST00000344626 DYRK1BQ9Y463 629 aa16.77■□□□□ 0.28
SMARCA4-201ENST00000344626 CLUHO75153 1309 aa16.77■□□□□ 0.28
SMARCA4-201ENST00000344626 MYADML2A6NDP7 307 aa16.77■□□□□ 0.28
SMARCA4-201ENST00000344626 ANGPT2O15123 496 aa16.77■□□□□ 0.28
SMARCA4-201ENST00000344626 DNTTP04053 509 aa16.77■□□□□ 0.28
SMARCA4-201ENST00000344626 ZNF7P17097 686 aaPredicted RBP16.77■□□□□ 0.28
SMARCA4-201ENST00000344626 RABGGTBP53611 331 aa16.77■□□□□ 0.28
SMARCA4-201ENST00000344626 POU5F1Q01860 360 aaKnown RBP16.77■□□□□ 0.28
SMARCA4-201ENST00000344626 MEA1Q16626 185 aa16.77■□□□□ 0.28
SMARCA4-201ENST00000344626 C4orf33Q8N1A6 199 aa16.77■□□□□ 0.28
SMARCA4-201ENST00000344626 C2orf15Q8WU43 125 aaKnown RBP16.77■□□□□ 0.28
SMARCA4-201ENST00000344626 MBOAT7Q96N66 472 aa16.77■□□□□ 0.28
SMARCA4-201ENST00000344626 ANGPTL2Q9UKU9 493 aa16.77■□□□□ 0.28
SMARCA4-201ENST00000344626 TRIM16O95361 564 aa16.77■□□□□ 0.27
SMARCA4-201ENST00000344626 PTPN3P26045 913 aa16.77■□□□□ 0.27
SMARCA4-201ENST00000344626 ITGA9Q13797 1035 aa16.77■□□□□ 0.27
SMARCA4-201ENST00000344626 HHIPL1Q96JK4 782 aa16.77■□□□□ 0.27
SMARCA4-201ENST00000344626 EPC1Q9H2F5 836 aa16.77■□□□□ 0.27
SMARCA4-201ENST00000344626 SNED1Q8TER0 1413 aa16.77■□□□□ 0.27
SMARCA4-201ENST00000344626 RAP1GDS1P52306 607 aa16.77■□□□□ 0.27
SMARCA4-201ENST00000344626 ENPEPQ07075 957 aa16.77■□□□□ 0.27
SMARCA4-201ENST00000344626 PPP1R26Q5T8A7 1209 aaPredicted RBP16.77■□□□□ 0.27
SMARCA4-201ENST00000344626 FAM46CQ5VWP2 391 aa16.77■□□□□ 0.27
SMARCA4-201ENST00000344626 TIFAQ96CG3 184 aa16.77■□□□□ 0.27
SMARCA4-201ENST00000344626 SERPINB12Q96P63 405 aa16.77■□□□□ 0.27
SMARCA4-201ENST00000344626 TRIM49D1C9J1S8 452 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 MDM4O15151 490 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 PJA2O43164 708 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 GLRA3O75311 464 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 CYP1A2P05177 515 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 TYMPP19971 482 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 NAA25Q14CX7 972 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 SUGP1Q8IWZ8 645 aaKnown RBP16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 OSCP1Q8WVF1 389 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 RNF39Q9H2S5 420 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 SCN11AQ9UI33 1791 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 SYNDIG1LA6NDD5 238 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 KDELR1P24390 212 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 INTS6LQ5JSJ4 861 aaKnown RBP16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 VPS37AQ8NEZ2 397 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 OTUB1Q96FW1 271 aaPredicted RBP16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 TBL1YQ9BQ87 522 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 LHX5Q9H2C1 402 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 DNPEPQ9ULA0 475 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 RP1L1Q8IWN7 2480 aaPredicted RBP16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 RNF103O00237 685 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 MATKP42679 507 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 TIGD5Q53EQ6 642 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 FOXR1Q6PIV2 292 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 MFSD7Q6UXD7 560 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 ARL14EPQ8N8R7 260 aaPredicted RBP16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 MYCBPAPQ8TBZ2 947 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 AHCYL2Q96HN2 611 aaKnown RBP16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 ACBD6Q9BR61 282 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 GANQ9H2C0 597 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 TAPT1Q6NXT6 567 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 GLT6D1Q7Z4J2 308 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 ST13P5Q8NFI4 369 aaPredicted RBP16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 CXorf40AQ8TE69 158 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 SHOC2Q9UQ13 582 aa16.76■□□□□ 0.27
SMARCA4-201ENST00000344626 TBC1D3DA0A087WVF3 549 aa16.75■□□□□ 0.27
SMARCA4-201ENST00000344626 TBC1D3IA0A087WXS9 549 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms