RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 COMMD8Q9NX08 183 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 MTRRQ9UBK8 725 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 HS3ST4Q9Y661 456 aa20.56■□□□□ 0.88
RTN1-202ENST00000342503 WDR27A2RRH5 827 aa20.55■□□□□ 0.88
RTN1-202ENST00000342503 SRRM3A6NNA2 597 aaPredicted RBP20.55■□□□□ 0.88
RTN1-202ENST00000342503 RPL17P18621 184 aaKnown RBP20.55■□□□□ 0.88
RTN1-202ENST00000342503 PSMB4P28070 264 aa20.55■□□□□ 0.88
RTN1-202ENST00000342503 HOXC13P31276 330 aa20.55■□□□□ 0.88
RTN1-202ENST00000342503 HTR7P34969 479 aa20.55■□□□□ 0.88
RTN1-202ENST00000342503 GARSP41250 739 aaKnown RBP20.55■□□□□ 0.88
RTN1-202ENST00000342503 GRIA1P42261 906 aa20.55■□□□□ 0.88
RTN1-202ENST00000342503 MAGEA3P43357 314 aa20.55■□□□□ 0.88
RTN1-202ENST00000342503 TBX4P57082 545 aa20.55■□□□□ 0.88
RTN1-202ENST00000342503 RPL10AP62906 217 aaKnown RBP20.55■□□□□ 0.88
RTN1-202ENST00000342503 EFEMP1Q12805 493 aa20.55■□□□□ 0.88
RTN1-202ENST00000342503 PSMD5Q16401 504 aa20.55■□□□□ 0.88
RTN1-202ENST00000342503 PARP6Q2NL67 630 aa20.55■□□□□ 0.88
RTN1-202ENST00000342503 RASIP1Q5U651 963 aa20.55■□□□□ 0.88
RTN1-202ENST00000342503 PID1Q7Z2X4 250 aa20.55■□□□□ 0.88
RTN1-202ENST00000342503 RNF168Q8IYW5 571 aaPredicted RBP20.55■□□□□ 0.88
RTN1-202ENST00000342503 GIPC2Q8TF65 315 aa20.55■□□□□ 0.88
RTN1-202ENST00000342503 CFAP36Q96G28 342 aa20.55■□□□□ 0.88
RTN1-202ENST00000342503 SLC39A13Q96H72 371 aa20.55■□□□□ 0.88
RTN1-202ENST00000342503 XPO6Q96QU8 1125 aaKnown RBP20.55■□□□□ 0.88
RTN1-202ENST00000342503 C11orf49Q9H6J7 331 aa20.55■□□□□ 0.88
RTN1-202ENST00000342503 TLR8Q9NR97 1041 aaKnown RBP20.55■□□□□ 0.88
RTN1-202ENST00000342503 TMEM51Q9NW97 253 aa20.55■□□□□ 0.88
RTN1-202ENST00000342503 IGSF9Q9P2J2 1179 aa20.55■□□□□ 0.88
RTN1-202ENST00000342503 FETUBQ9UGM5 382 aa20.55■□□□□ 0.88
RTN1-202ENST00000342503 GJA8P48165 433 aa20.54■□□□□ 0.88
RTN1-202ENST00000342503 SEC24CP53992 1094 aa20.54■□□□□ 0.88
RTN1-202ENST00000342503 SPOUT1Q5T280 376 aaKnown RBP20.54■□□□□ 0.88
RTN1-202ENST00000342503 SLC8B1Q6J4K2 584 aa20.54■□□□□ 0.88
RTN1-202ENST00000342503 FBXO46Q6PJ61 603 aaPredicted RBP20.54■□□□□ 0.88
RTN1-202ENST00000342503 TMCO2Q7Z6W1 182 aaPredicted RBP20.54■□□□□ 0.88
RTN1-202ENST00000342503 C14orf80Q86SX3 495 aa20.54■□□□□ 0.88
RTN1-202ENST00000342503 SRRM1Q8IYB3 904 aaKnown RBP20.54■□□□□ 0.88
RTN1-202ENST00000342503 PDCD7Q8N8D1 485 aaKnown RBP20.54■□□□□ 0.88
RTN1-202ENST00000342503 TOP1MTQ969P6 601 aa20.54■□□□□ 0.88
RTN1-202ENST00000342503 PAWRQ96IZ0 340 aaKnown RBP20.54■□□□□ 0.88
RTN1-202ENST00000342503 XAB2Q9HCS7 855 aaKnown RBP20.54■□□□□ 0.88
RTN1-202ENST00000342503 EIF2B3Q9NR50 452 aaKnown RBP20.54■□□□□ 0.88
RTN1-202ENST00000342503 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.54■□□□□ 0.88
RTN1-202ENST00000342503 CLIC5Q9NZA1 410 aa20.54■□□□□ 0.88
RTN1-202ENST00000342503 KLHL8Q9P2G9 620 aaPredicted RBP20.54■□□□□ 0.88
RTN1-202ENST00000342503 PSMC3IPQ9P2W1 217 aaPredicted RBP20.54■□□□□ 0.88
RTN1-202ENST00000342503 BACE2Q9Y5Z0 518 aa20.54■□□□□ 0.88
RTN1-202ENST00000342503 SLC38A8A6NNN8 435 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 FGF10O15520 208 aaPredicted RBP20.53■□□□□ 0.88
RTN1-202ENST00000342503 SPAG6O75602 509 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 BRAFP15056 766 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 SARNPP82979 210 aaKnown RBP20.53■□□□□ 0.88
RTN1-202ENST00000342503 NR1H3Q13133 447 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 RASA2Q15283 850 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 FAM117BQ6P1L5 589 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 FOXR1Q6PIV2 292 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 ANKLE1Q8NAG6 615 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 ATXN2LQ8WWM7 1075 aaKnown RBP20.53■□□□□ 0.88
RTN1-202ENST00000342503 LRRC39Q96DD0 335 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 SIGLEC10Q96LC7 697 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 DHRS4Q9BTZ2 278 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 CATSPERBQ9H7T0 1116 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 INTS9Q9NV88 658 aaKnown RBP20.53■□□□□ 0.88
RTN1-202ENST00000342503 ZC3H7BQ9UGR2 993 aaKnown RBP20.53■□□□□ 0.88
RTN1-202ENST00000342503 ACTL7BQ9Y614 415 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 ABHD14A-ACY1A0A1B0GW23 586 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 TCRBV9S1A1TA0A576 114 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 TMEM120BA0PK00 339 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 RASA4BC9J798 803 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 E9PAM4 449 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 RASA4O43374 803 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 PIAS1O75925 651 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 TBX18O95935 607 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 CPP00450 1065 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 ATF6P18850 670 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 ITGB8P26012 769 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 OR1D2P34982 312 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 PSEN1P49768 467 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 DEFB103AP81534 67 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 CDK16Q00536 496 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 NRG1Q02297 640 aaPredicted RBP20.53■□□□□ 0.88
RTN1-202ENST00000342503 PKN2Q16513 984 aaKnown RBP20.53■□□□□ 0.88
RTN1-202ENST00000342503 PIK3R6Q5UE93 754 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 TRABD2AQ86V40 505 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 NLRP14Q86W24 1093 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 MPP5Q8N3R9 675 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 ARMC5Q96C12 935 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 ZNF689Q96CS4 500 aaPredicted RBP20.53■□□□□ 0.88
RTN1-202ENST00000342503 PAFAH2Q99487 392 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 KCNK9Q9NPC2 374 aa20.53■□□□□ 0.88
RTN1-202ENST00000342503 OLA1Q9NTK5 396 aaKnown RBP20.53■□□□□ 0.88
RTN1-202ENST00000342503 C2CD2LO14523 706 aa20.52■□□□□ 0.88
RTN1-202ENST00000342503 MTSS1O43312 755 aa20.52■□□□□ 0.88
RTN1-202ENST00000342503 SLC2A3P11169 496 aa20.52■□□□□ 0.88
RTN1-202ENST00000342503 TUBP50607 506 aa20.52■□□□□ 0.88
RTN1-202ENST00000342503 MLLT6P55198 1093 aaPredicted RBP20.52■□□□□ 0.88
RTN1-202ENST00000342503 COG7P83436 770 aa20.52■□□□□ 0.88
RTN1-202ENST00000342503 ZBTB17Q13105 803 aa20.52■□□□□ 0.88
RTN1-202ENST00000342503 KIAA1841Q6NSI8 718 aa20.52■□□□□ 0.88
RTN1-202ENST00000342503 LRRC8BQ6P9F7 803 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms