RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 TCRBV5S1A1TA0A578 114 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 TCEA3O75764 348 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 FOXN2P32314 431 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 DAOAP59103 153 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 BNIP1Q12981 228 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 LRRC26Q2I0M4 334 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 ZNF280DQ6N043 979 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 DENND5BQ6ZUT9 1274 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 FAM47EQ6ZV65 393 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 RNF157Q96PX1 679 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 FTHL17Q9BXU8 183 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 NKIRAS1Q9NYS0 192 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 LGALS13Q9UHV8 139 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 SCN10AQ9Y5Y9 1956 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 GOLGA8CPA6NN73 597 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 A8MUI8 341 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 RASA4BC9J798 803 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 RASA4O43374 803 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 SPAG7O75391 227 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 ITGB8P26012 769 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 MAGEA4P43358 317 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 SESN2P58004 480 aaPredicted RBP13.44□□□□□ -0.26
COL18A1-201ENST00000342220 COPS2P61201 443 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 USP46P62068 366 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 MGAT5Q09328 741 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 OLIG2Q13516 323 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 ANKRD22Q5VYY1 191 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 HEATR6Q6AI08 1181 aaKnown RBP13.44□□□□□ -0.26
COL18A1-201ENST00000342220 SLC26A9Q7LBE3 791 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 PID1Q7Z2X4 250 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 MRPL10Q7Z7H8 261 aaKnown RBP13.44□□□□□ -0.26
COL18A1-201ENST00000342220 ZNF598Q86UK7 904 aaKnown RBP13.44□□□□□ -0.26
COL18A1-201ENST00000342220 PALM2Q8IXS6 379 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 KLHL29Q96CT2 875 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 GMIPQ9P107 970 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 PRKAG3Q9UGI9 489 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 VANGL2Q9ULK5 521 aa13.44□□□□□ -0.26
COL18A1-201ENST00000342220 FNDC3AQ9Y2H6 1198 aaKnown RBP13.44□□□□□ -0.26
COL18A1-201ENST00000342220 TCRBV7S3A2A0A539 114 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 SLC4A1P02730 911 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 AMHP03971 560 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 F7P08709 466 aaPredicted RBP13.43□□□□□ -0.26
COL18A1-201ENST00000342220 KRT16P08779 473 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 EN2P19622 333 aaPredicted RBP13.43□□□□□ -0.26
COL18A1-201ENST00000342220 KLRC2P26717 231 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 XKR4Q5GH76 650 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 ANKRD20A2Q5SQ80 823 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 ANKRD20A1Q5TYW2 823 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 ANKRD20A3Q5VUR7 823 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 RNF19BQ6ZMZ0 732 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 ARHGEF18Q6ZSZ5 1173 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 TAC4Q86UU9 113 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 CIR1Q86X95 450 aaPredicted RBP13.43□□□□□ -0.26
COL18A1-201ENST00000342220 COLGALT2Q8IYK4 626 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 KLF6Q99612 283 aaPredicted RBP13.43□□□□□ -0.26
COL18A1-201ENST00000342220 DNAAF2Q9NVR5 837 aaKnown RBP13.43□□□□□ -0.26
COL18A1-201ENST00000342220 KANSL3Q9P2N6 904 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 STK38LQ9Y2H1 464 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 MGAMO43451 1857 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 GABRDO14764 452 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 TPD52L2O43399 206 aaKnown RBP13.43□□□□□ -0.26
COL18A1-201ENST00000342220 EOMESO95936 686 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 NOS2P35228 1153 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 TAF10Q12962 218 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 GPNMBQ14956 572 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 PKDCCQ504Y2 493 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 RSPO2Q6UXX9 243 aaPredicted RBP13.43□□□□□ -0.26
COL18A1-201ENST00000342220 DCP1BQ8IZD4 617 aaKnown RBP13.43□□□□□ -0.26
COL18A1-201ENST00000342220 MAGEB18Q96M61 343 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 ACBD6Q9BR61 282 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 CCDC77Q9BR77 488 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 NMUR1Q9HB89 426 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 KLHL8Q9P2G9 620 aaPredicted RBP13.43□□□□□ -0.26
COL18A1-201ENST00000342220 CHD7Q9P2D1 2997 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 GOLGA8RI6L899 631 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 LIN7AO14910 233 aaPredicted RBP13.43□□□□□ -0.26
COL18A1-201ENST00000342220 GALTP07902 379 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 TAC1P20366 129 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 RPL22P35268 128 aaKnown RBP13.43□□□□□ -0.26
COL18A1-201ENST00000342220 WDR4P57081 412 aaKnown RBP13.43□□□□□ -0.26
COL18A1-201ENST00000342220 STAT4Q14765 748 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 NPAS4Q8IUM7 802 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 PLD5Q8N7P1 536 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 SUSD3Q96L08 255 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 UBE2OQ9C0C9 1292 aaKnown RBP13.43□□□□□ -0.26
COL18A1-201ENST00000342220 OR12D3Q9UGF7 316 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 PCDHB5Q9Y5E4 795 aa13.43□□□□□ -0.26
COL18A1-201ENST00000342220 E2F8A0AVK6 867 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 STAU1O95793 577 aaKnown RBP13.42□□□□□ -0.26
COL18A1-201ENST00000342220 SSTR1P30872 391 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 TUBP50607 506 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 ARL13BQ3SXY8 428 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 SLC25A52Q3SY17 297 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 PLEKHG4Q58EX7 1191 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 ARL10Q8N8L6 244 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 CSPG4P5Q96PW8 444 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 ATXN3LQ9H3M9 355 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 RXFP1Q9HBX9 757 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 EURLQ9NYK6 297 aa13.42□□□□□ -0.26
COL18A1-201ENST00000342220 SF3B1O75533 1304 aaKnown RBP eCLIP13.42□□□□□ -0.262e-6■■■■■ 58.8
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms