RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 FGBP02675 491 aa20.02■□□□□ 0.8
SEMA6C-201ENST00000341697 CPA3P15088 417 aa20.02■□□□□ 0.8
SEMA6C-201ENST00000341697 RAP1GDS1P52306 607 aa20.02■□□□□ 0.8
SEMA6C-201ENST00000341697 DDX39BQ13838 428 aaKnown RBP20.02■□□□□ 0.8
SEMA6C-201ENST00000341697 AGGF1Q8N302 714 aaeCLIP20.02■□□□□ 0.8
SEMA6C-201ENST00000341697 TUBGCP3Q96CW5 907 aa20.02■□□□□ 0.8
SEMA6C-201ENST00000341697 LRRC39Q96DD0 335 aa20.02■□□□□ 0.8
SEMA6C-201ENST00000341697 OTUB1Q96FW1 271 aaPredicted RBP20.02■□□□□ 0.8
SEMA6C-201ENST00000341697 ZNF333Q96JL9 665 aa20.02■□□□□ 0.8
SEMA6C-201ENST00000341697 NTPCRQ9BSD7 190 aaKnown RBP20.02■□□□□ 0.8
SEMA6C-201ENST00000341697 KCND1Q9NSA2 647 aa20.02■□□□□ 0.8
SEMA6C-201ENST00000341697 PHTF1Q9UMS5 762 aa20.02■□□□□ 0.8
SEMA6C-201ENST00000341697 ALDH1A2O94788 518 aa20.02■□□□□ 0.79
SEMA6C-201ENST00000341697 SMAD3P84022 425 aaKnown RBP20.02■□□□□ 0.79
SEMA6C-201ENST00000341697 KRT72Q14CN4 511 aa20.02■□□□□ 0.79
SEMA6C-201ENST00000341697 ACBD5Q5T8D3 534 aaPredicted RBP20.02■□□□□ 0.79
SEMA6C-201ENST00000341697 NPNTQ6UXI9 565 aa20.02■□□□□ 0.79
SEMA6C-201ENST00000341697 PSTKQ8IV42 348 aaKnown RBP20.02■□□□□ 0.79
SEMA6C-201ENST00000341697 ZSWIM2Q8NEG5 633 aa20.02■□□□□ 0.79
SEMA6C-201ENST00000341697 C10orf88Q9H8K7 445 aa20.02■□□□□ 0.79
SEMA6C-201ENST00000341697 CTNNAL1Q9UBT7 734 aa20.02■□□□□ 0.79
SEMA6C-201ENST00000341697 RPTORQ8N122 1335 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 PBX1P40424 430 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 CDK16Q00536 496 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 ZNF470Q6ECI4 717 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 TMC3Q7Z5M5 1100 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 PHACTR4Q8IZ21 702 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 OSGEPL1Q9H4B0 414 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 SPASTQ9UBP0 616 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 EIF3LQ9Y262 564 aaKnown RBP20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 SPTLC1O15269 473 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 TM9SF1O15321 606 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 SSTR1P30872 391 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 ARHGAP1Q07960 439 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 PRPF39Q86UA1 669 aaKnown RBP20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 HDAC7Q8WUI4 952 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 MRPL46Q9H2W6 279 aaKnown RBP20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 NCKIPSDQ9NZQ3 722 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 SKAP2O75563 359 aaPredicted RBP20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 TPBGLP0DKB5 382 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 DUSP4Q13115 394 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 ZCCHC9Q8N567 271 aaKnown RBP20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 CPNE1Q99829 537 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 RGPD2P0DJD1 1756 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 GRK2P25098 689 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 SERPINH1P50454 418 aaKnown RBP20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 OVGP1Q12889 678 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 ITGA9Q13797 1035 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 LRRC34Q8IZ02 419 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 HJURPQ8NCD3 748 aaPredicted RBP20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 SNX27Q96L92 541 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 TXNRD2Q9NNW7 524 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 NINJ2Q9NZG7 142 aa20.01■□□□□ 0.79
SEMA6C-201ENST00000341697 ARFGEF2Q9Y6D5 1785 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 WASHC5Q12768 1159 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 BRMS1LQ5PSV4 323 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 IFNEQ86WN2 208 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 SUGP1Q8IWZ8 645 aaKnown RBP20■□□□□ 0.79
SEMA6C-201ENST00000341697 TRIML2Q8N7C3 387 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 OXCT2Q9BYC2 517 aaPredicted RBP20■□□□□ 0.79
SEMA6C-201ENST00000341697 FAM124BQ9H5Z6 455 aaPredicted RBP20■□□□□ 0.79
SEMA6C-201ENST00000341697 WDR3Q9UNX4 943 aaKnown RBP eCLIP20■□□□□ 0.79
SEMA6C-201ENST00000341697 NCKAP1Q9Y2A7 1128 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 DYRK1BQ9Y463 629 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 LIASO43766 372 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 DDHD2O94830 711 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 FBXW4P57775 412 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 PPIGQ13427 754 aaKnown RBP eCLIP20■□□□□ 0.79
SEMA6C-201ENST00000341697 ACOX1Q15067 660 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 ZCWPW2Q504Y3 356 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 CACHD1Q5VU97 1274 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 BBS12Q6ZW61 710 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 GDF3Q9NR23 364 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20■□□□□ 0.79
SEMA6C-201ENST00000341697 ZNF536O15090 1300 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 RCCD1A6NED2 376 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 CCDC85CA6NKD9 419 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 B2RBV5 119 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 IFRD1O00458 451 aaPredicted RBP20■□□□□ 0.79
SEMA6C-201ENST00000341697 CHADO15335 359 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 TBL1XO60907 577 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 USP12O75317 370 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 CDC25CP30307 473 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 ACLYP53396 1101 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 SCARA3Q6AZY7 606 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 LLGL2Q6P1M3 1020 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 FZD8Q9H461 694 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 RGS18Q9NS28 235 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 TRMT13Q9NUP7 481 aaKnown RBP20■□□□□ 0.79
SEMA6C-201ENST00000341697 SRRDQ9UH36 339 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 SCAMP3O14828 347 aaKnown RBP20■□□□□ 0.79
SEMA6C-201ENST00000341697 LGR5O75473 907 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 AIF1P55008 147 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 RARS2Q5T160 578 aaKnown RBP20■□□□□ 0.79
SEMA6C-201ENST00000341697 SLC22A9Q8IVM8 553 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 GPR152Q8TDT2 470 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 NFKBIZQ9BYH8 718 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 Q9Y3F1 56 aa20■□□□□ 0.79
SEMA6C-201ENST00000341697 LOC100653049A0A140TA62 436 aa19.99■□□□□ 0.79
SEMA6C-201ENST00000341697 KRT34O76011 436 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms