RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 ASLP04424 464 aa20.85■□□□□ 0.93
SYNE2-201ENST00000341472 ADRB1P08588 477 aa20.85■□□□□ 0.93
SYNE2-201ENST00000341472 SERPINF2P08697 491 aa20.85■□□□□ 0.93
SYNE2-201ENST00000341472 ENGP17813 658 aa20.85■□□□□ 0.93
SYNE2-201ENST00000341472 NOS2P35228 1153 aa20.85■□□□□ 0.93
SYNE2-201ENST00000341472 CSKP41240 450 aa20.85■□□□□ 0.93
SYNE2-201ENST00000341472 GFPT1Q06210 699 aaPredicted RBP20.85■□□□□ 0.93
SYNE2-201ENST00000341472 MTA1Q13330 715 aa20.85■□□□□ 0.93
SYNE2-201ENST00000341472 KRT31Q15323 416 aa20.85■□□□□ 0.93
SYNE2-201ENST00000341472 UAP1L1Q3KQV9 507 aa20.85■□□□□ 0.93
SYNE2-201ENST00000341472 FSCBQ5H9T9 825 aa20.85■□□□□ 0.93
SYNE2-201ENST00000341472 CDKAL1Q5VV42 579 aa20.85■□□□□ 0.93
SYNE2-201ENST00000341472 TAF3Q5VWG9 929 aa20.85■□□□□ 0.93
SYNE2-201ENST00000341472 SLC26A9Q7LBE3 791 aa20.85■□□□□ 0.93
SYNE2-201ENST00000341472 ZNF397Q8NF99 534 aaPredicted RBP20.85■□□□□ 0.93
SYNE2-201ENST00000341472 CADM4Q8NFZ8 388 aa20.85■□□□□ 0.93
SYNE2-201ENST00000341472 C18orf8Q96DM3 657 aa20.85■□□□□ 0.93
SYNE2-201ENST00000341472 FBRSQ9HAH7 460 aa20.85■□□□□ 0.93
SYNE2-201ENST00000341472 PRSS16Q9NQE7 514 aa20.85■□□□□ 0.93
SYNE2-201ENST00000341472 INTS6Q9UL03 887 aaKnown RBP20.85■□□□□ 0.93
SYNE2-201ENST00000341472 RALGAPA1Q6GYQ0 2036 aa20.84■□□□□ 0.93
SYNE2-201ENST00000341472 KCNK5O95279 499 aa20.84■□□□□ 0.93
SYNE2-201ENST00000341472 IGLV3-19P01714 112 aa20.84■□□□□ 0.93
SYNE2-201ENST00000341472 GNSP15586 552 aa20.84■□□□□ 0.93
SYNE2-201ENST00000341472 CDH5P33151 784 aaPredicted RBP20.84■□□□□ 0.93
SYNE2-201ENST00000341472 MAPK8P45983 427 aa20.84■□□□□ 0.93
SYNE2-201ENST00000341472 ATXN3P54252 364 aaPredicted RBP20.84■□□□□ 0.93
SYNE2-201ENST00000341472 RNASE9P60153 205 aaKnown RBP20.84■□□□□ 0.93
SYNE2-201ENST00000341472 NME3Q13232 169 aa20.84■□□□□ 0.93
SYNE2-201ENST00000341472 FKBP15Q5T1M5 1219 aa20.84■□□□□ 0.93
SYNE2-201ENST00000341472 MMS22LQ6ZRQ5 1243 aa20.84■□□□□ 0.93
SYNE2-201ENST00000341472 ERICH1Q86X53 443 aa20.84■□□□□ 0.93
SYNE2-201ENST00000341472 PRMT1Q99873 361 aaKnown RBP20.84■□□□□ 0.93
SYNE2-201ENST00000341472 RRN3Q9NYV6 651 aa20.84■□□□□ 0.93
SYNE2-201ENST00000341472 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.84■□□□□ 0.93
SYNE2-201ENST00000341472 EML5Q05BV3 1969 aa20.84■□□□□ 0.93
SYNE2-201ENST00000341472 M0QYT0 321 aa20.83■□□□□ 0.93
SYNE2-201ENST00000341472 DAB1O75553 588 aa20.83■□□□□ 0.93
SYNE2-201ENST00000341472 MAOBP27338 520 aa20.83■□□□□ 0.93
SYNE2-201ENST00000341472 MATKP42679 507 aa20.83■□□□□ 0.93
SYNE2-201ENST00000341472 ZBTB16Q05516 673 aa20.83■□□□□ 0.93
SYNE2-201ENST00000341472 PITRM1Q5JRX3 1037 aa20.83■□□□□ 0.93
SYNE2-201ENST00000341472 RABGAP1LQ5R372 815 aa20.83■□□□□ 0.93
SYNE2-201ENST00000341472 CACUL1Q86Y37 369 aa20.83■□□□□ 0.93
SYNE2-201ENST00000341472 ANKRD20A12PQ8NF67 263 aa20.83■□□□□ 0.93
SYNE2-201ENST00000341472 CAPN10Q9HC96 672 aa20.83■□□□□ 0.93
SYNE2-201ENST00000341472 SUSD2Q9UGT4 822 aa20.83■□□□□ 0.93
SYNE2-201ENST00000341472 METTL12A8MUP2 240 aa20.82■□□□□ 0.92
SYNE2-201ENST00000341472 F8VZ95 297 aa20.82■□□□□ 0.92
SYNE2-201ENST00000341472 LSM8O95777 96 aaKnown RBP20.82■□□□□ 0.92
SYNE2-201ENST00000341472 SYPP08247 313 aa20.82■□□□□ 0.92
SYNE2-201ENST00000341472 C7P10643 843 aa20.82■□□□□ 0.92
SYNE2-201ENST00000341472 GABRB2P47870 512 aa20.82■□□□□ 0.92
SYNE2-201ENST00000341472 RPS14P62263 151 aaKnown RBP20.82■□□□□ 0.92
SYNE2-201ENST00000341472 N4BP2L1Q5TBK1 243 aaPredicted RBP20.82■□□□□ 0.92
SYNE2-201ENST00000341472 TTC39BQ5VTQ0 682 aaPredicted RBP20.82■□□□□ 0.92
SYNE2-201ENST00000341472 FBXL22Q6P050 247 aa20.82■□□□□ 0.92
SYNE2-201ENST00000341472 NOP9Q86U38 636 aaKnown RBP20.82■□□□□ 0.92
SYNE2-201ENST00000341472 FAM124AQ86V42 546 aa20.82■□□□□ 0.92
SYNE2-201ENST00000341472 KDM1BQ8NB78 822 aa20.82■□□□□ 0.92
SYNE2-201ENST00000341472 MSANTD4Q8NCY6 345 aa20.82■□□□□ 0.92
SYNE2-201ENST00000341472 DNASE2BQ8WZ79 361 aa20.82■□□□□ 0.92
SYNE2-201ENST00000341472 MRGPRX3Q96LB0 322 aa20.82■□□□□ 0.92
SYNE2-201ENST00000341472 GTPBP2Q9BX10 602 aaKnown RBP20.82■□□□□ 0.92
SYNE2-201ENST00000341472 FSCN3Q9NQT6 498 aa20.82■□□□□ 0.92
SYNE2-201ENST00000341472 ERVW-1Q9UQF0 538 aa20.82■□□□□ 0.92
SYNE2-201ENST00000341472 THADAQ6YHU6 1953 aa20.81■□□□□ 0.92
SYNE2-201ENST00000341472 MEI4A8MW99 385 aa20.81■□□□□ 0.92
SYNE2-201ENST00000341472 MBD3O95983 291 aa20.81■□□□□ 0.92
SYNE2-201ENST00000341472 F9P00740 461 aa20.81■□□□□ 0.92
SYNE2-201ENST00000341472 DNTTP04053 509 aa20.81■□□□□ 0.92
SYNE2-201ENST00000341472 SRPRAP08240 638 aaKnown RBP20.81■□□□□ 0.92
SYNE2-201ENST00000341472 CDK11BP21127 795 aaKnown RBP20.81■□□□□ 0.92
SYNE2-201ENST00000341472 OXCT1P55809 520 aa20.81■□□□□ 0.92
SYNE2-201ENST00000341472 POLR2FP61218 127 aaKnown RBP20.81■□□□□ 0.92
SYNE2-201ENST00000341472 ECT2LQ008S8 904 aa20.81■□□□□ 0.92
SYNE2-201ENST00000341472 SLC12A1Q13621 1099 aa20.81■□□□□ 0.92
SYNE2-201ENST00000341472 AUHQ13825 339 aaKnown RBP20.81■□□□□ 0.92
SYNE2-201ENST00000341472 STX1AQ16623 288 aa20.81■□□□□ 0.92
SYNE2-201ENST00000341472 HNRNPA1L2Q32P51 320 aaKnown RBP20.81■□□□□ 0.92
SYNE2-201ENST00000341472 PLEKHG6Q3KR16 790 aa20.81■□□□□ 0.92
SYNE2-201ENST00000341472 RNF219Q5W0B1 726 aaPredicted RBP20.81■□□□□ 0.92
SYNE2-201ENST00000341472 APCDD1Q8J025 514 aa20.81■□□□□ 0.92
SYNE2-201ENST00000341472 CCAR2Q8N163 923 aaKnown RBP20.81■□□□□ 0.92
SYNE2-201ENST00000341472 RPRD1AQ96P16 312 aaPredicted RBP20.81■□□□□ 0.92
SYNE2-201ENST00000341472 PPP1R9BQ96SB3 815 aa20.81■□□□□ 0.92
SYNE2-201ENST00000341472 NPY6RQ99463 290 aa20.81■□□□□ 0.92
SYNE2-201ENST00000341472 GANQ9H2C0 597 aa20.81■□□□□ 0.92
SYNE2-201ENST00000341472 MTG2Q9H4K7 406 aa20.81■□□□□ 0.92
SYNE2-201ENST00000341472 WDCPQ9H6R7 721 aa20.81■□□□□ 0.92
SYNE2-201ENST00000341472 FAM207AQ9NSI2 230 aaPredicted RBP20.81■□□□□ 0.92
SYNE2-201ENST00000341472 TMEM51Q9NW97 253 aa20.81■□□□□ 0.92
SYNE2-201ENST00000341472 STAP1Q9ULZ2 295 aa20.81■□□□□ 0.92
SYNE2-201ENST00000341472 TPRP12270 2363 aaKnown RBP20.8■□□□□ 0.92
SYNE2-201ENST00000341472 ARHGAP33O14559 1287 aa20.8■□□□□ 0.92
SYNE2-201ENST00000341472 RNASEH1O60930 286 aaKnown RBP20.8■□□□□ 0.92
SYNE2-201ENST00000341472 GFPT2O94808 682 aa20.8■□□□□ 0.92
SYNE2-201ENST00000341472 MMEP08473 750 aa20.8■□□□□ 0.92
SYNE2-201ENST00000341472 SCNN1AP37088 669 aa20.8■□□□□ 0.92
SYNE2-201ENST00000341472 CTSOP43234 321 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms