RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 TTC16Q8NEE8 873 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 MRPS31Q92665 395 aaKnown RBP17.86■□□□□ 0.45
CLDN4-201ENST00000340958 NEUROG2Q9H2A3 272 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 MAN1C1Q9NR34 630 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 ASAH2Q9NR71 780 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 VANGL2Q9ULK5 521 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 NEU2Q9Y3R4 380 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 XIRP2A4UGR9 3374 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 BCLAF3A2AJT9 711 aaKnown RBP17.86■□□□□ 0.45
CLDN4-201ENST00000340958 HACD1B0YJ81 288 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 STK10O94804 968 aaKnown RBP17.86■□□□□ 0.45
CLDN4-201ENST00000340958 FAM153BP0C7A2 387 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 IRF1P10914 325 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 MYL4P12829 197 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 SLC11A2P49281 568 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 ITGA8P53708 1063 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 CAV1Q03135 178 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 FAM153CQ494X1 144 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 MS4A13Q5J8X5 152 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 ACBD5Q5T8D3 534 aaPredicted RBP17.86■□□□□ 0.45
CLDN4-201ENST00000340958 PIK3R6Q5UE93 754 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 RAP1GAP2Q684P5 730 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 ELMSAN1Q6PJG2 1045 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 CHSY1Q86X52 802 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 TAB3Q8N5C8 712 aaPredicted RBP17.86■□□□□ 0.45
CLDN4-201ENST00000340958 GLIS1Q8NBF1 620 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 NETO2Q8NC67 525 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 MAFAQ8NHW3 353 aaPredicted RBP17.86■□□□□ 0.45
CLDN4-201ENST00000340958 FBXO25Q8TCJ0 367 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 SLC22A17Q8WUG5 538 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 CAVIN3Q969G5 261 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 ATXN3LQ9H3M9 355 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 ZNF446Q9NWS9 450 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 GRHL1Q9NZI5 618 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 FAM153AQ9UHL3 310 aa17.86■□□□□ 0.45
CLDN4-201ENST00000340958 NDC80O14777 642 aa17.85■□□□□ 0.45
CLDN4-201ENST00000340958 PER2O15055 1255 aa17.85■□□□□ 0.45
CLDN4-201ENST00000340958 F11P03951 625 aa17.85■□□□□ 0.45
CLDN4-201ENST00000340958 POU3F3P20264 500 aaPredicted RBP17.85■□□□□ 0.45
CLDN4-201ENST00000340958 MX2P20592 715 aa17.85■□□□□ 0.45
CLDN4-201ENST00000340958 ECHS1P30084 290 aa17.85■□□□□ 0.45
CLDN4-201ENST00000340958 CDC25CP30307 473 aa17.85■□□□□ 0.45
CLDN4-201ENST00000340958 KCNQ1P51787 676 aa17.85■□□□□ 0.45
CLDN4-201ENST00000340958 AUHQ13825 339 aaKnown RBP17.85■□□□□ 0.45
CLDN4-201ENST00000340958 HS6ST3Q8IZP7 471 aa17.85■□□□□ 0.45
CLDN4-201ENST00000340958 MICALL1Q8N3F8 863 aa17.85■□□□□ 0.45
CLDN4-201ENST00000340958 ART4Q93070 314 aa17.85■□□□□ 0.45
CLDN4-201ENST00000340958 PLD4Q96BZ4 506 aa17.85■□□□□ 0.45
CLDN4-201ENST00000340958 QKIQ96PU8 341 aaKnown RBP eCLIP17.85■□□□□ 0.45
CLDN4-201ENST00000340958 FAM129AQ9BZQ8 928 aa17.85■□□□□ 0.45
CLDN4-201ENST00000340958 SMPD4Q9NXE4 827 aa17.85■□□□□ 0.45
CLDN4-201ENST00000340958 SEPT10Q9P0V9 454 aa17.85■□□□□ 0.45
CLDN4-201ENST00000340958 DPP7Q9UHL4 492 aa17.85■□□□□ 0.45
CLDN4-201ENST00000340958 TPX2Q9ULW0 747 aaKnown RBP17.85■□□□□ 0.45
CLDN4-201ENST00000340958 RAD54BQ9Y620 910 aa17.85■□□□□ 0.45
CLDN4-201ENST00000340958 NCAM2O15394 837 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 CLASP2O75122 1294 aaKnown RBP17.84■□□□□ 0.45
CLDN4-201ENST00000340958 OAS1P00973 400 aaKnown RBP17.84■□□□□ 0.45
CLDN4-201ENST00000340958 IGLV3-27P01718 113 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 HDCP19113 662 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 CAMK1Q14012 370 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 CASP8Q14790 479 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 TXNDC8Q6A555 127 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 PCGF5Q86SE9 256 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 C14orf80Q86SX3 495 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 RPRD1AQ96P16 312 aaPredicted RBP17.84■□□□□ 0.45
CLDN4-201ENST00000340958 LGMNQ99538 433 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 RNF38Q9H0F5 515 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 MPP6Q9NZW5 540 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 DFFAO00273 331 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 RPL22P35268 128 aaKnown RBP17.84■□□□□ 0.45
CLDN4-201ENST00000340958 BASP1P80723 227 aaKnown RBP17.84■□□□□ 0.45
CLDN4-201ENST00000340958 CYP4F8P98187 520 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 NRG1Q02297 640 aaPredicted RBP17.84■□□□□ 0.45
CLDN4-201ENST00000340958 CCDC85BQ15834 202 aaPredicted RBP17.84■□□□□ 0.45
CLDN4-201ENST00000340958 ZDHHC24Q6UX98 284 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 CCDC25Q86WR0 208 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 DENND1CQ8IV53 801 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 ARL14EPQ8N8R7 260 aaPredicted RBP17.84■□□□□ 0.45
CLDN4-201ENST00000340958 HTR3CQ8WXA8 447 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 PPM1EQ8WY54 764 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 CELF6Q96J87 481 aaKnown RBP17.84■□□□□ 0.45
CLDN4-201ENST00000340958 CYP2S1Q96SQ9 504 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 ZYG11BQ9C0D3 744 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 GKN1Q9NS71 199 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 ZDHHC18Q9NUE0 388 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 DONSONQ9NYP3 566 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 PAK5Q9P286 719 aa17.84■□□□□ 0.45
CLDN4-201ENST00000340958 F5H5T6 163 aa17.83■□□□□ 0.44
CLDN4-201ENST00000340958 DNALI1O14645 258 aaPredicted RBP17.83■□□□□ 0.44
CLDN4-201ENST00000340958 ATP8B1O43520 1251 aa17.83■□□□□ 0.44
CLDN4-201ENST00000340958 XYLBO75191 536 aa17.83■□□□□ 0.44
CLDN4-201ENST00000340958 RFPL2O75678 378 aa17.83■□□□□ 0.44
CLDN4-201ENST00000340958 EPCAMP16422 314 aa17.83■□□□□ 0.44
CLDN4-201ENST00000340958 CORO1AP31146 461 aaKnown RBP17.83■□□□□ 0.44
CLDN4-201ENST00000340958 DHX9Q08211 1270 aaKnown RBP17.83■□□□□ 0.44
CLDN4-201ENST00000340958 RTL10Q7L3V2 364 aa17.83■□□□□ 0.44
CLDN4-201ENST00000340958 TMEM150AQ86TG1 271 aa17.83■□□□□ 0.44
CLDN4-201ENST00000340958 LZTR1Q8N653 840 aa17.83■□□□□ 0.44
CLDN4-201ENST00000340958 NPWQ8N729 165 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms