RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 NOCTQ9UK39 431 aaKnown RBP13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 INVSQ9Y283 1065 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 RAD54BQ9Y620 910 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 CACNA1AO00555 2505 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 CKAP5Q14008 2032 aa13.8□□□□□ -0.2
SIRPB3P-201ENST00000340424 WASH3PC4AMC7 463 aa13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 SLC30A4O14863 429 aa13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 GRAP2O75791 330 aa13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 GFPT2O94808 682 aa13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 EPHX1P07099 455 aa13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 CCDC172P0C7W6 258 aa13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 OXTRP30559 389 aa13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 DHPSP49366 369 aaPredicted RBP13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 RPS24P62847 133 aaKnown RBP13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 NOMO3P69849 1222 aa13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 RPL6Q02878 288 aaKnown RBP13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 CAMK2GQ13555 558 aaPredicted RBP13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 ANO6Q4KMQ2 910 aa13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 FNDC3BQ53EP0 1204 aaKnown RBP13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 BRMS1LQ5PSV4 323 aa13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 FAM102AQ5T9C2 384 aaPredicted RBP13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 TAF3Q5VWG9 929 aa13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 LYSMD4Q5XG99 296 aa13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 RAP1GAP2Q684P5 730 aa13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 XYLT1Q86Y38 959 aa13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 LGI2Q8N0V4 545 aa13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 AOPEPQ8N6M6 819 aa13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 PRCCQ92733 491 aaPredicted RBP13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 NT5C3BQ969T7 300 aa13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 LMLNQ96KR4 655 aa13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 PRMT1Q99873 361 aaKnown RBP13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 HSD3B7Q9H2F3 369 aa13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 KIAA1522Q9P206 1035 aaPredicted RBP13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 STIM2Q9P246 746 aa13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 USP36Q9P275 1121 aaKnown RBP13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 SUN2Q9UH99 717 aa13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 EVLQ9UI08 416 aaPredicted RBP13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 MBD1Q9UIS9 605 aaPredicted RBP13.79□□□□□ -0.2
SIRPB3P-201ENST00000340424 MUC22E2RYF6 1773 aaPredicted RBP13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 THADAQ6YHU6 1953 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 IGHV1OR15-9A0A0B4J2B8 117 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 A0A1B0GVM2 712 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 TCAF2A6NFQ2 919 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 H0Y626 953 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 M0QYT0 321 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 KHNYNO15037 678 aaKnown RBP13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 NDUFS2O75306 463 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 IGLV3-19P01714 112 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 MMEP08473 750 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 ACADMP11310 421 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 PRKCHP24723 683 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 CD70P32970 193 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 KLK7P49862 253 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 ST8SIA6P61647 398 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 PITX1P78337 314 aaPredicted RBP13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 ZBTB16Q05516 673 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 ARID5BQ14865 1188 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 PTPRNQ16849 979 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 KLHL40Q2TBA0 621 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 SLC25A52Q3SY17 297 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 PEAR1Q5VY43 1037 aaPredicted RBP13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 NAA35Q5VZE5 725 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 CAVIN1Q6NZI2 390 aaKnown RBP13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 KIAA1324Q6UXG2 1013 aaKnown RBP13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 APTXQ7Z2E3 356 aaKnown RBP13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 TMPRSS6Q8IU80 811 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 SYT12Q8IV01 421 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 CARNMT1Q8N4J0 409 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 OR2T3Q8NH03 318 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 CEP76Q8TAP6 659 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 WFDC5Q8TCV5 224 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 SORCS1Q8WY21 1168 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 FOXJ1Q92949 421 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 SIPA1Q96FS4 1042 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 NPY6RQ99463 290 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 NLRC4Q9NPP4 1024 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 XPO7Q9UIA9 1087 aaKnown RBP13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 MYO6Q9UM54 1294 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 NUP205Q92621 2012 aa13.78□□□□□ -0.2
SIRPB3P-201ENST00000340424 SYNJ2BP-COX16A0A087WUM0 186 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 EPHB6O15197 1021 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 CYP1A1P04798 512 aaPredicted RBP13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 SRPRAP08240 638 aaKnown RBP13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 MMP8P22894 467 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 CD6P30203 668 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 CSKP41240 450 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 CXCR3P49682 368 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 COPAP53621 1224 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 ATXN1P54253 815 aaKnown RBP13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 FMO1Q01740 532 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 SULT2A1Q06520 285 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 SFSWAPQ12872 951 aaKnown RBP13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 LMAN2Q12907 356 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 NME3Q13232 169 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 SF3A2Q15428 464 aaKnown RBP13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 FILIP1LQ4L180 1135 aa13.77□□□□□ -0.21
SIRPB3P-201ENST00000340424 PITRM1Q5JRX3 1037 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms