RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 COCHO43405 550 aa21.8■■□□□ 1.08
VRK2-201ENST00000340157 BANF1O75531 89 aa21.8■■□□□ 1.08
VRK2-201ENST00000340157 TTC4O95801 387 aa21.8■■□□□ 1.08
VRK2-201ENST00000340157 ELF1P32519 619 aa21.8■■□□□ 1.08
VRK2-201ENST00000340157 ACTN2P35609 894 aa21.8■■□□□ 1.08
VRK2-201ENST00000340157 BMPR1AP36894 532 aa21.8■■□□□ 1.08
VRK2-201ENST00000340157 MAGEA6P43360 314 aa21.8■■□□□ 1.08
VRK2-201ENST00000340157 KCNQ1P51787 676 aa21.8■■□□□ 1.08
VRK2-201ENST00000340157 PPIDQ08752 370 aaKnown RBP21.8■■□□□ 1.08
VRK2-201ENST00000340157 KYNUQ16719 465 aa21.8■■□□□ 1.08
VRK2-201ENST00000340157 FNBP1LQ5T0N5 605 aa21.8■■□□□ 1.08
VRK2-201ENST00000340157 LILRA6Q6PI73 481 aa21.8■■□□□ 1.08
VRK2-201ENST00000340157 PDZD4Q76G19 769 aaPredicted RBP21.8■■□□□ 1.08
VRK2-201ENST00000340157 UHMK1Q8TAS1 419 aaKnown RBP21.8■■□□□ 1.08
VRK2-201ENST00000340157 DPF3Q92784 378 aa21.8■■□□□ 1.08
VRK2-201ENST00000340157 HDAC11Q96DB2 347 aa21.8■■□□□ 1.08
VRK2-201ENST00000340157 C9orf72Q96LT7 481 aa21.8■■□□□ 1.08
VRK2-201ENST00000340157 SPATA13Q96N96 652 aa21.8■■□□□ 1.08
VRK2-201ENST00000340157 PRMT1Q99873 361 aaKnown RBP21.8■■□□□ 1.08
VRK2-201ENST00000340157 WDR83Q9BRX9 315 aaKnown RBP21.8■■□□□ 1.08
VRK2-201ENST00000340157 CEP41Q9BYV8 373 aa21.8■■□□□ 1.08
VRK2-201ENST00000340157 ZNF334Q9HCZ1 680 aaPredicted RBP21.8■■□□□ 1.08
VRK2-201ENST00000340157 VANGL2Q9ULK5 521 aa21.8■■□□□ 1.08
VRK2-201ENST00000340157 MAFFQ9ULX9 164 aa21.8■■□□□ 1.08
VRK2-201ENST00000340157 RANBP2P49792 3224 aaKnown RBP21.8■■□□□ 1.08
VRK2-201ENST00000340157 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.79■■□□□ 1.08
VRK2-201ENST00000340157 POLR3GO15318 223 aaPredicted RBP21.79■■□□□ 1.08
VRK2-201ENST00000340157 CHADO15335 359 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 FGF10O15520 208 aaPredicted RBP21.79■■□□□ 1.08
VRK2-201ENST00000340157 OPA1O60313 960 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 ACSL3O95573 720 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 CXCL14O95715 111 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 CA8P35219 290 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 CTNNB1P35222 781 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 SERPINB6P35237 376 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 GARSP41250 739 aaKnown RBP21.79■■□□□ 1.08
VRK2-201ENST00000340157 MAGEA4P43358 317 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 AUHQ13825 339 aaKnown RBP21.79■■□□□ 1.08
VRK2-201ENST00000340157 ANKRD20A2Q5SQ80 823 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 ANKRD20A1Q5TYW2 823 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 ANKRD20A3Q5VUR7 823 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 TMC7Q7Z402 723 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 PSMG2Q969U7 264 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 SAYSD1Q9NPB0 183 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 DNMT3LQ9UJW3 386 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 LINC01553A4QN01 128 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 ATP5C1P36542 298 aaKnown RBP21.79■■□□□ 1.08
VRK2-201ENST00000340157 VEPH1Q14D04 833 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 HIF1AQ16665 826 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 HECTD3Q5T447 861 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 NADSYN1Q6IA69 706 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 KLHDC10Q6PID8 442 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 NLRP14Q86W24 1093 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 ATP6V0D2Q8N8Y2 350 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 MYEOVQ96EZ4 313 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 KLHL5Q96PQ7 755 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 CDK5RAP1Q96SZ6 601 aaKnown RBP21.79■■□□□ 1.08
VRK2-201ENST00000340157 TCF25Q9BQ70 676 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 C17orf80Q9BSJ5 609 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 CATSPERBQ9H7T0 1116 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 TRPM5Q9NZQ8 1165 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 SSX2IPQ9Y2D8 614 aa21.79■■□□□ 1.08
VRK2-201ENST00000340157 HBS1LQ9Y450 684 aaKnown RBP21.79■■□□□ 1.08
VRK2-201ENST00000340157 DOCK6Q96HP0 2047 aa21.78■■□□□ 1.08
VRK2-201ENST00000340157 C2orf78A6NCI8 922 aa21.78■■□□□ 1.08
VRK2-201ENST00000340157 HIDE1A8MVS5 230 aa21.78■■□□□ 1.08
VRK2-201ENST00000340157 KCNK1O00180 336 aa21.78■■□□□ 1.08
VRK2-201ENST00000340157 NCAM2O15394 837 aa21.78■■□□□ 1.08
VRK2-201ENST00000340157 CSPG5O95196 566 aa21.78■■□□□ 1.08
VRK2-201ENST00000340157 MYOGP15173 224 aa21.78■■□□□ 1.08
VRK2-201ENST00000340157 MTM1Q13496 603 aa21.78■■□□□ 1.08
VRK2-201ENST00000340157 HP1BP3Q5SSJ5 553 aaPredicted RBP21.78■■□□□ 1.08
VRK2-201ENST00000340157 ZNF567Q8N184 647 aa21.78■■□□□ 1.08
VRK2-201ENST00000340157 RTL3Q8N8U3 475 aaKnown RBP21.78■■□□□ 1.08
VRK2-201ENST00000340157 RNF38Q9H0F5 515 aa21.78■■□□□ 1.08
VRK2-201ENST00000340157 IL21Q9HBE4 155 aa21.78■■□□□ 1.08
VRK2-201ENST00000340157 TMBIM4Q9HC24 238 aa21.78■■□□□ 1.08
VRK2-201ENST00000340157 MYO7AQ13402 2215 aa21.78■■□□□ 1.08
VRK2-201ENST00000340157 IGLV3-10A0A075B6K4 115 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 E7ESA3 106 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 SMAPO00193 183 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 OAS1P00973 400 aaKnown RBP21.77■■□□□ 1.08
VRK2-201ENST00000340157 EPHB3P54753 998 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 GYS2P54840 703 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 AFMIDQ63HM1 303 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 RAP1GAP2Q684P5 730 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 FBXL22Q6P050 247 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 C4orf22Q6V702 233 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 ARHGAP36Q6ZRI8 547 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 CCDC13Q8IYE1 715 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 ZSCAN18Q8TBC5 510 aaPredicted RBP21.77■■□□□ 1.08
VRK2-201ENST00000340157 IGSF8Q969P0 613 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 NOL6Q9H6R4 1146 aaKnown RBP21.77■■□□□ 1.08
VRK2-201ENST00000340157 SEPT10Q9P0V9 454 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 LZTS1Q9Y250 596 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 IRAK3Q9Y616 596 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 LAMA3Q16787 3333 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 WASH4PA8MWX3 477 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 ALOX15BO15296 676 aa21.77■■□□□ 1.08
VRK2-201ENST00000340157 CNTN5O94779 1100 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms