RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 SGK1O00141 431 aa15.75■□□□□ 0.11
UBE3B-201ENST00000340074 ADAM23O75077 832 aa15.75■□□□□ 0.11
UBE3B-201ENST00000340074 IRAK1P51617 712 aa15.75■□□□□ 0.11
UBE3B-201ENST00000340074 CDH18Q13634 790 aa15.75■□□□□ 0.11
UBE3B-201ENST00000340074 SLC18A3Q16572 532 aa15.75■□□□□ 0.11
UBE3B-201ENST00000340074 ASTE1Q2TB18 679 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-201ENST00000340074 HSF5Q4G112 596 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-201ENST00000340074 FSCBQ5H9T9 825 aa15.75■□□□□ 0.11
UBE3B-201ENST00000340074 TTC39BQ5VTQ0 682 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-201ENST00000340074 CCAR2Q8N163 923 aaKnown RBP15.75■□□□□ 0.11
UBE3B-201ENST00000340074 ZNF557Q8N988 423 aaPredicted RBP15.75■□□□□ 0.11
UBE3B-201ENST00000340074 TC2NQ8N9U0 490 aa15.75■□□□□ 0.11
UBE3B-201ENST00000340074 C1orf74Q96LT6 269 aa15.75■□□□□ 0.11
UBE3B-201ENST00000340074 ACOX2Q99424 681 aa15.75■□□□□ 0.11
UBE3B-201ENST00000340074 CNPY3Q9BT09 278 aa15.75■□□□□ 0.11
UBE3B-201ENST00000340074 THAP2Q9H0W7 228 aa15.75■□□□□ 0.11
UBE3B-201ENST00000340074 GGA2Q9UJY4 613 aa15.75■□□□□ 0.11
UBE3B-201ENST00000340074 NENFQ9UMX5 172 aa15.75■□□□□ 0.11
UBE3B-201ENST00000340074 SCINQ9Y6U3 715 aa15.75■□□□□ 0.11
UBE3B-201ENST00000340074 CHD5Q8TDI0 1954 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 NYNRINQ9P2P1 1898 aaKnown RBP15.74■□□□□ 0.11
UBE3B-201ENST00000340074 TMEM191CA6NGB0 347 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 H0Y626 953 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 PABPC1P11940 636 aaKnown RBP15.74■□□□□ 0.11
UBE3B-201ENST00000340074 ADRA1BP35368 520 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 WASP42768 502 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 NHLH1Q02575 133 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 DMWDQ09019 674 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 ZNF252P-AS1Q0IIN9 211 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 LMAN2Q12907 356 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 ARL13BQ3SXY8 428 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 C5orf22Q49AR2 442 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 TMEM92Q6UXU6 159 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 CHST9Q7L1S5 443 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 KIAA0907Q7Z7F0 614 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-201ENST00000340074 ADIPOR2Q86V24 386 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 CCDC117Q8IWD4 279 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-201ENST00000340074 ZNF683Q8IZ20 524 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 AHI1Q8N157 1196 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 CCDC185Q8N715 623 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.74■□□□□ 0.11
UBE3B-201ENST00000340074 SORCS1Q8WY21 1168 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 LMLNQ96KR4 655 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 HHIPQ96QV1 700 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 TRIM7Q9C029 511 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 CIPCQ9C0C6 399 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 NHEJ1Q9H9Q4 299 aaPredicted RBP15.74■□□□□ 0.11
UBE3B-201ENST00000340074 MRPL47Q9HD33 250 aaKnown RBP15.74■□□□□ 0.11
UBE3B-201ENST00000340074 ELOVL2Q9NXB9 296 aa15.74■□□□□ 0.11
UBE3B-201ENST00000340074 FRYLO94915 3013 aa15.73■□□□□ 0.11
UBE3B-201ENST00000340074 A0A1B0GVM2 712 aa15.73■□□□□ 0.11
UBE3B-201ENST00000340074 TCAF2A6NFQ2 919 aa15.73■□□□□ 0.11
UBE3B-201ENST00000340074 AKR1B10O60218 316 aa15.73■□□□□ 0.11
UBE3B-201ENST00000340074 SRGAP2O75044 1071 aa15.73■□□□□ 0.11
UBE3B-201ENST00000340074 HNRNPLP14866 589 aaKnown RBP eCLIP15.73■□□□□ 0.11
UBE3B-201ENST00000340074 PSMA2P25787 234 aa15.73■□□□□ 0.11
UBE3B-201ENST00000340074 NTSR1P30989 418 aa15.73■□□□□ 0.11
UBE3B-201ENST00000340074 GALCP54803 685 aa15.73■□□□□ 0.11
UBE3B-201ENST00000340074 EIF4HQ15056 248 aaKnown RBP15.73■□□□□ 0.11
UBE3B-201ENST00000340074 CRY1Q16526 586 aa15.73■□□□□ 0.11
UBE3B-201ENST00000340074 EOGTQ5NDL2 527 aa15.73■□□□□ 0.11
UBE3B-201ENST00000340074 ACBD5Q5T8D3 534 aaPredicted RBP15.73■□□□□ 0.11
UBE3B-201ENST00000340074 HEATR6Q6AI08 1181 aaKnown RBP15.73■□□□□ 0.11
UBE3B-201ENST00000340074 SCYL2Q6P3W7 929 aa15.73■□□□□ 0.11
UBE3B-201ENST00000340074 LRRC31Q6UY01 552 aa15.73■□□□□ 0.11
UBE3B-201ENST00000340074 TRMT11Q7Z4G4 463 aaKnown RBP15.73■□□□□ 0.11
UBE3B-201ENST00000340074 CHPFQ8IZ52 775 aa15.73■□□□□ 0.11
UBE3B-201ENST00000340074 WFIKKN2Q8TEU8 576 aa15.73■□□□□ 0.11
UBE3B-201ENST00000340074 UCMAQ8WVF2 138 aa15.73■□□□□ 0.11
UBE3B-201ENST00000340074 NELL1Q92832 810 aa15.73■□□□□ 0.11
UBE3B-201ENST00000340074 MAGEB5Q9BZ81 275 aa15.73■□□□□ 0.11
UBE3B-201ENST00000340074 CACNA2D2Q9NY47 1150 aa15.73■□□□□ 0.11
UBE3B-201ENST00000340074 KIAA1522Q9P206 1035 aaPredicted RBP15.73■□□□□ 0.11
UBE3B-201ENST00000340074 SPAG17Q6Q759 2223 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 E9PAM4 449 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 TIMM44O43615 452 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 CNTN5O94779 1100 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 DESP17661 470 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 PXNP49023 591 aaPredicted RBP15.72■□□□□ 0.11
UBE3B-201ENST00000340074 FNTBP49356 437 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 FUT11Q495W5 492 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 ARTNQ5T4W7 220 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 MBLAC2Q68D91 279 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 SDE2Q6IQ49 451 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 SLFN11Q7Z7L1 901 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 CAMKK1Q8N5S9 505 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 FNIP1Q8TF40 1166 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 CYB5D2Q8WUJ1 264 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 NTAN1Q96AB6 310 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 ARHGEF26Q96DR7 871 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 CCDC42Q96M95 316 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 PACSIN1Q9BY11 444 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 FAM126AQ9BYI3 521 aaPredicted RBP15.72■□□□□ 0.11
UBE3B-201ENST00000340074 SPTLC3Q9NUV7 552 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 ZSCAN32Q9NX65 697 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 MPP6Q9NZW5 540 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 THAP10Q9P2Z0 257 aaPredicted RBP15.72■□□□□ 0.11
UBE3B-201ENST00000340074 OR12D3Q9UGF7 316 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 R4GN57 208 aa15.72■□□□□ 0.11
UBE3B-201ENST00000340074 CEP192Q8TEP8 1941 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms