RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 USP33Q8TEY7 942 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 KCTD15Q96SI1 283 aaPredicted RBP16.55■□□□□ 0.24
SCARB1-202ENST00000339570 SNX15Q9NRS6 342 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 SOWAHBA6NEL2 793 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 TK2O00142 265 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 ACKR2O00590 384 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 TRDMT1O14717 391 aaKnown RBP16.55■□□□□ 0.24
SCARB1-202ENST00000339570 TARBP2Q15633 366 aaKnown RBP16.55■□□□□ 0.24
SCARB1-202ENST00000339570 GSTA3Q16772 222 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 RPS27LQ71UM5 84 aaKnown RBP16.55■□□□□ 0.24
SCARB1-202ENST00000339570 ZBTB46Q86UZ6 589 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 NAT14Q8WUY8 206 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 SNRNP27Q8WVK2 155 aaKnown RBP16.55■□□□□ 0.24
SCARB1-202ENST00000339570 HTR3CQ8WXA8 447 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 NIFKQ9BYG3 293 aaKnown RBP16.55■□□□□ 0.24
SCARB1-202ENST00000339570 FRMD8P1Q9BZ68 369 aaPredicted RBP16.55■□□□□ 0.24
SCARB1-202ENST00000339570 LIN28AQ9H9Z2 209 aaKnown RBP16.55■□□□□ 0.24
SCARB1-202ENST00000339570 DPP3Q9NY33 737 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 KLK14Q9P0G3 267 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 KLHL8Q9P2G9 620 aaPredicted RBP16.55■□□□□ 0.24
SCARB1-202ENST00000339570 COPG2Q9UBF2 871 aa16.55■□□□□ 0.24
SCARB1-202ENST00000339570 XPO1O14980 1071 aaKnown RBP16.54■□□□□ 0.24
SCARB1-202ENST00000339570 GLRA3O75311 464 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 XRCC1P18887 633 aaPredicted RBP16.54■□□□□ 0.24
SCARB1-202ENST00000339570 FLOT2Q14254 428 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 SLC10A6Q3KNW5 377 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 DCAF6Q58WW2 860 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 TDRD5Q8NAT2 981 aaKnown RBP16.54■□□□□ 0.24
SCARB1-202ENST00000339570 TTC16Q8NEE8 873 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 RCN3Q96D15 328 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 CMTM5Q96DZ9 223 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 MFSD3Q96ES6 412 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 TMEM233B4DJY2 109 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 PFKMP08237 780 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 AOC1P19801 751 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 SCNN1BP51168 640 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 TMCO4Q5TGY1 634 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 ACAD11Q709F0 780 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 RNF135Q8IUD6 432 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 DCUN1D1Q96GG9 259 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 CSPG4P5Q96PW8 444 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 AS3MTQ9HBK9 375 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 ANLNQ9NQW6 1124 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 GGA3Q9NZ52 723 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 ADA2Q9NZK5 511 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 ZNF180Q9UJW8 692 aa16.54■□□□□ 0.24
SCARB1-202ENST00000339570 BARX2Q9UMQ3 279 aaPredicted RBP16.54■□□□□ 0.24
SCARB1-202ENST00000339570 THOP1P52888 689 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 COG7P83436 770 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 KLF10Q13118 480 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 MXD4Q14582 209 aaPredicted RBP16.53■□□□□ 0.24
SCARB1-202ENST00000339570 C18orf25Q96B23 403 aaPredicted RBP16.53■□□□□ 0.24
SCARB1-202ENST00000339570 TBCBQ99426 244 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 NPAS2Q99743 824 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 DMAP1Q9NPF5 467 aaPredicted RBP16.53■□□□□ 0.24
SCARB1-202ENST00000339570 ARHGAP26Q9UNA1 814 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 BRCA2P51587 3418 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 WDR81Q562E7 1941 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 KLHL33A6NCF5 533 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 L1CAMP32004 1257 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 USP46P62068 366 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 GHRHRQ02643 423 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 SURF1Q15526 300 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 ZNF618Q5T7W0 954 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 PCDH20Q8N6Y1 951 aaKnown RBP16.53■□□□□ 0.24
SCARB1-202ENST00000339570 AGBL3Q8NEM8 1001 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 FCRL3Q96P31 734 aaPredicted RBP16.53■□□□□ 0.24
SCARB1-202ENST00000339570 FAM49AQ9H0Q0 323 aaPredicted RBP16.53■□□□□ 0.24
SCARB1-202ENST00000339570 TASP1Q9H6P5 420 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 B4GALT4O60513 344 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 CLPTM1O96005 669 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 JUNP05412 331 aaKnown RBP16.53■□□□□ 0.24
SCARB1-202ENST00000339570 ZNF286BP0CG31 522 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 RPL10P27635 214 aaKnown RBP16.53■□□□□ 0.24
SCARB1-202ENST00000339570 ARL4AP40617 200 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 MCCD1P59942 119 aaPredicted RBP16.53■□□□□ 0.24
SCARB1-202ENST00000339570 IFRD2Q12894 506 aaPredicted RBP16.53■□□□□ 0.24
SCARB1-202ENST00000339570 CERCAMQ5T4B2 595 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 FBXW8Q8N3Y1 598 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 BHLHE22Q8NFJ8 381 aaPredicted RBP16.53■□□□□ 0.24
SCARB1-202ENST00000339570 OPTNQ96CV9 577 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 P2RY11Q96G91 374 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 BCO2Q9BYV7 579 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 PREBQ9HCU5 417 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 UBAP1Q9NZ09 502 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 LZTS1Q9Y250 596 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 ANKRD12Q6UB98 2062 aa16.53■□□□□ 0.24
SCARB1-202ENST00000339570 A0A096LPK6 155 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 GABBR2O75899 941 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 P4HA1P13674 534 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 DESP17661 470 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 TGM2P21980 687 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 ABCD1P33897 745 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 SERPINB9P50453 376 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 CHN2P52757 468 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 SLC6A3Q01959 620 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 TMED1Q13445 227 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 PDK2Q15119 407 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 OLFML1Q6UWY5 402 aa16.52■□□□□ 0.24
SCARB1-202ENST00000339570 CATSPERGQ6ZRH7 1159 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms