RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 WASH4PA8MWX3 477 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 SLC9A3R1O14745 358 aaPredicted RBP14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 MCF2LO15068 1137 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 NCAM2O15394 837 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 PRAMEF12O95522 483 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 ERCC2P18074 760 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 AMPD1P23109 780 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 GGCXP38435 758 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 DLX2Q07687 328 aaPredicted RBP14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 ZNF77Q15935 545 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 NCBP2-AS2Q69YL0 99 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 CCDC70Q6NSX1 233 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 FBXL22Q6P050 247 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 GET4Q7L5D6 327 aaPredicted RBP14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 LGI2Q8N0V4 545 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 RTL3Q8N8U3 475 aaKnown RBP14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 ACTL9Q8TC94 416 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 NKD2Q969F2 451 aaPredicted RBP14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 MAGOHBQ96A72 148 aaKnown RBP14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 E2F7Q96AV8 911 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 OTUB2Q96DC9 234 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 ZSWIM3Q96MP5 696 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 ASB16Q96NS5 453 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 TRPV4Q9HBA0 871 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 OBP2AQ9NY56 170 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 FEZ2Q9UHY8 353 aaPredicted RBP14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 CCL26Q9Y258 94 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 SNX10Q9Y5X0 201 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 SZT2Q5T011 3432 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 SLC6A4P31645 630 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 LMNB2Q03252 620 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 BYSLQ13895 437 aaKnown RBP14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 CBX2Q14781 532 aaPredicted RBP14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 NOMO1Q15155 1222 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 ZDHHC14Q8IZN3 488 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 MMGT1Q8N4V1 131 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 HJURPQ8NCD3 748 aaPredicted RBP14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 SMG9Q9H0W8 520 aaKnown RBP14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 TMEM248Q9NWD8 314 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 PCYOX1Q9UHG3 505 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 CD207Q9UJ71 328 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 NR2E1Q9Y466 385 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 HEY1Q9Y5J3 304 aa14.97□□□□□ -0.01
NIPAL3-202ENST00000339255 SHROOM3Q8TF72 1996 aa14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 A0A1B0GVM2 712 aa14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 TCAF2A6NFQ2 919 aa14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 LIASO43766 372 aa14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 MX2P20592 715 aa14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 MAPKAPK2P49137 400 aa14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 VCPP55072 806 aaKnown RBP14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 OTUD4Q01804 1114 aaKnown RBP14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 C2orf54Q08AI8 447 aa14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 XRCC4Q13426 336 aa14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 DHX34Q14147 1143 aaKnown RBP14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 FAM78AQ5JUQ0 283 aa14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 MPP7Q5T2T1 576 aa14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 ARTNQ5T4W7 220 aa14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 CHST9Q7L1S5 443 aa14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 C14orf80Q86SX3 495 aa14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 SLC35B2Q8TB61 432 aa14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 GRK7Q8WTQ7 553 aa14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 ATG4AQ8WYN0 398 aa14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 SLCO2A1Q92959 643 aa14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 HAUS1Q96CS2 278 aa14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 CDX2Q99626 313 aaPredicted RBP14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 DDX47Q9H0S4 455 aaKnown RBP14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 R3HDM2Q9Y2K5 976 aaKnown RBP14.96□□□□□ -0.01
NIPAL3-202ENST00000339255 CLDN11O75508 207 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 ITGAVP06756 1048 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 FOSL2P15408 326 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 PECAM1P16284 738 aaPredicted RBP14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 CDH4P55283 916 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 GBE1Q04446 702 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 PDK1Q15118 436 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 GLE1Q53GS7 698 aaKnown RBP14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 RFWD3Q6PCD5 774 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 C1orf228Q6PIY5 440 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 CCDC137Q6PK04 289 aaKnown RBP14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 MAATS1Q7Z4T9 603 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 NLRP14Q86W24 1093 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 LRRC49Q8IUZ0 686 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 BBS7Q8IWZ6 715 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 TTC16Q8NEE8 873 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 CCDC26Q8TAB7 109 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 C1orf54Q8WWF1 131 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 WBP2Q969T9 261 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 PRICKLE1Q96MT3 831 aaPredicted RBP14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 OLFM3Q96PB7 478 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 FERMT1Q9BQL6 677 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 BRD8Q9H0E9 1235 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 ETNK2Q9NVF9 386 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 DTLQ9NZJ0 730 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 MPP6Q9NZW5 540 aa14.95□□□□□ -0.02
NIPAL3-202ENST00000339255 GOLGA6L7A0A1B0GV03 622 aa14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 CFAP69A5D8W1 941 aa14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 HACD1B0YJ81 288 aa14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 GFRA2O00451 464 aa14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 PPP1R12AO14974 1030 aaPredicted RBP14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 MFSD11O43934 449 aa14.94□□□□□ -0.02
NIPAL3-202ENST00000339255 GAS8O95995 478 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms