RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 LRRC39Q96DD0 335 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 TMEM209Q96SK2 561 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 TMEM175Q9BSA9 504 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 PBX4Q9BYU1 374 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 WDCPQ9H6R7 721 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 KIF9Q9HAQ2 790 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 SAMD15Q9P1V8 674 aa11.41□□□□□ -0.58
LRP1-202ENST00000338962 ZC3H7BQ9UGR2 993 aaKnown RBP11.41□□□□□ -0.58
LRP1-202ENST00000338962 LCHNA4D1U4 455 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 FAM72CH0Y354 149 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 H0YHG0 523 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 B4GALT3O60512 393 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 OPHN1O60890 802 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 GBP2P32456 591 aaPredicted RBP11.4□□□□□ -0.58
LRP1-202ENST00000338962 SARNPP82979 210 aaKnown RBP11.4□□□□□ -0.58
LRP1-202ENST00000338962 IFT88Q13099 833 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 CBLBQ13191 982 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 SEMA5AQ13591 1074 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 PAFAH1B3Q15102 231 aaKnown RBP11.4□□□□□ -0.58
LRP1-202ENST00000338962 PRKD1Q15139 912 aaPredicted RBP11.4□□□□□ -0.58
LRP1-202ENST00000338962 ANKRD20A2Q5SQ80 823 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 FAM72AQ5TYM5 149 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 ANKRD20A1Q5TYW2 823 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 ANKRD20A3Q5VUR7 823 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 FAM72DQ6L9T8 149 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 ADGRD1Q6QNK2 874 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 DENND5BQ6ZUT9 1274 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 CAND1Q86VP6 1230 aaKnown RBP11.4□□□□□ -0.58
LRP1-202ENST00000338962 FAM72BQ86X60 149 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 C4orf33Q8N1A6 199 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 FIBCD1Q8N539 461 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 ANKS4BQ8N8V4 417 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 CFAP36Q96G28 342 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 P2RY11Q96G91 374 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 EPAS1Q99814 870 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 DHRS4Q9BTZ2 278 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 XAB2Q9HCS7 855 aaKnown RBP11.4□□□□□ -0.58
LRP1-202ENST00000338962 PCDHB8Q9UN66 801 aa11.4□□□□□ -0.58
LRP1-202ENST00000338962 MRPL42Q9Y6G3 142 aaKnown RBP11.4□□□□□ -0.58
LRP1-202ENST00000338962 LAMA2P24043 3122 aaKnown RBP11.4□□□□□ -0.58
LRP1-202ENST00000338962 TCP11X1B4DZS4 312 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 RNF103O00237 685 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 DCLK1O15075 740 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 PRPF4O43172 522 aaKnown RBP eCLIP11.4□□□□□ -0.59
LRP1-202ENST00000338962 SPAG7O75391 227 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 ZNF189O75820 626 aaPredicted RBP11.4□□□□□ -0.59
LRP1-202ENST00000338962 ALDH2P05091 517 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 GALTP07902 379 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 INHBAP08476 426 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 ERCC2P18074 760 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 KRT4P19013 534 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 CA4P22748 312 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 FDFT1P37268 417 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 GRIK1P39086 918 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 OR1G1P47890 313 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 GLUD2P49448 558 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 LIG3P49916 1009 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 SLC18A1P54219 525 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 SEMA3BQ13214 749 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 RAB30Q15771 203 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 KBTBD12Q3ZCT8 623 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 SCML4Q8N228 414 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 CKAP2Q8WWK9 683 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 RNF34Q969K3 372 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 FAM193BQ96PV7 902 aaPredicted RBP11.4□□□□□ -0.59
LRP1-202ENST00000338962 TKTL2Q9H0I9 626 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 PRDM12Q9H4Q4 367 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 ANLNQ9NQW6 1124 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 SEPT10Q9P0V9 454 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 HCSTQ9UBK5 93 aa11.4□□□□□ -0.59
LRP1-202ENST00000338962 YBX2Q9Y2T7 364 aaKnown RBP11.4□□□□□ -0.59
LRP1-202ENST00000338962 GOLGA6L7A0A1B0GV03 622 aa11.39□□□□□ -0.59
LRP1-202ENST00000338962 LINC01553A4QN01 128 aa11.39□□□□□ -0.59
LRP1-202ENST00000338962 TMEM189-UBE2V1I3L0A0 370 aa11.39□□□□□ -0.59
LRP1-202ENST00000338962 I6L893 689 aaPredicted RBP11.39□□□□□ -0.59
LRP1-202ENST00000338962 NCAM2O15394 837 aa11.39□□□□□ -0.59
LRP1-202ENST00000338962 MYOGP15173 224 aa11.39□□□□□ -0.59
LRP1-202ENST00000338962 LAG3P18627 525 aa11.39□□□□□ -0.59
LRP1-202ENST00000338962 PBX2P40425 430 aa11.39□□□□□ -0.59
LRP1-202ENST00000338962 HCAR3P49019 387 aa11.39□□□□□ -0.59
LRP1-202ENST00000338962 CXCR3P49682 368 aa11.39□□□□□ -0.59
LRP1-202ENST00000338962 ZNF135P52742 658 aaPredicted RBP11.39□□□□□ -0.59
LRP1-202ENST00000338962 SLC5A3P53794 718 aa11.39□□□□□ -0.59
LRP1-202ENST00000338962 CDK16Q00536 496 aa11.39□□□□□ -0.59
LRP1-202ENST00000338962 IL9RQ01113 521 aa11.39□□□□□ -0.59
LRP1-202ENST00000338962 IFRD2Q12894 506 aaPredicted RBP11.39□□□□□ -0.59
LRP1-202ENST00000338962 NUGGCQ68CJ6 796 aa11.39□□□□□ -0.59
LRP1-202ENST00000338962 TAC4Q86UU9 113 aa11.39□□□□□ -0.59
LRP1-202ENST00000338962 AGGF1Q8N302 714 aaeCLIP11.39□□□□□ -0.591e-9■□□□□ 10.1
LRP1-202ENST00000338962 NETO2Q8NC67 525 aa11.39□□□□□ -0.59
LRP1-202ENST00000338962 CCDC197Q8NCU1 140 aa11.39□□□□□ -0.59
LRP1-202ENST00000338962 SCAMP5Q8TAC9 235 aa11.39□□□□□ -0.59
LRP1-202ENST00000338962 MAGEB18Q96M61 343 aa11.39□□□□□ -0.59
LRP1-202ENST00000338962 TGS1Q96RS0 853 aaKnown RBP11.39□□□□□ -0.59
LRP1-202ENST00000338962 PAIP2Q9BPZ3 127 aaKnown RBP11.39□□□□□ -0.59
LRP1-202ENST00000338962 DNAJB4Q9UDY4 337 aa11.39□□□□□ -0.59
LRP1-202ENST00000338962 OR12D3Q9UGF7 316 aa11.39□□□□□ -0.59
LRP1-202ENST00000338962 PRG3Q9Y2Y8 225 aaPredicted RBP11.39□□□□□ -0.59
LRP1-202ENST00000338962 RAD54BQ9Y620 910 aa11.39□□□□□ -0.59
LRP1-202ENST00000338962 MAD1L1Q9Y6D9 718 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms