RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ARFGEF2Q9Y6D5 1785 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 PYGLP06737 847 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 ADRA1BP35368 520 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 NIPA2Q8N8Q9 360 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 SDCCAG3Q96C92 435 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 MRPL1Q9BYD6 325 aaKnown RBP6.44□□□□□ -1.38
PRKDC-202ENST00000338368 SEPT4O43236 478 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 SKAP2O75563 359 aaPredicted RBP6.44□□□□□ -1.38
PRKDC-202ENST00000338368 DDHD2O94830 711 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 AIF1P55008 147 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 ITGA7Q13683 1181 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 CA9Q16790 459 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 BHMTQ93088 406 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 GPR63Q9BZJ6 419 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 SDCBP2Q9H190 292 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 GPAMQ9HCL2 828 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 MRPL40Q9NQ50 206 aaKnown RBP6.44□□□□□ -1.38
PRKDC-202ENST00000338368 CYLDQ9NQC7 956 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 FARP1Q9Y4F1 1045 aaPredicted RBP6.44□□□□□ -1.38
PRKDC-202ENST00000338368 URODP06132 367 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 CKMP06732 381 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 XRCC4Q13426 336 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 QPCTQ16769 361 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 FNBP1LQ5T0N5 605 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 TMEM110Q86TL2 294 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 BCO2Q9BYV7 579 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 HEATR9A2RTY3 570 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 EIF2B5Q13144 721 aaKnown RBP6.44□□□□□ -1.38
PRKDC-202ENST00000338368 PTRHD1Q6GMV3 140 aaKnown RBP6.44□□□□□ -1.38
PRKDC-202ENST00000338368 ANKS1BQ7Z6G8 1248 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 SUGP1Q8IWZ8 645 aaKnown RBP6.44□□□□□ -1.38
PRKDC-202ENST00000338368 OR52K1Q8NGK4 314 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 PCDH19Q8TAB3 1148 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 TMA16Q96EY4 203 aaKnown RBP6.44□□□□□ -1.38
PRKDC-202ENST00000338368 ZBTB18Q99592 522 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 NMRK2Q9NPI5 230 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 TBKBP1A7MCY6 615 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 CBX4O00257 560 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 SHOX2O60902 331 aaPredicted RBP6.44□□□□□ -1.38
PRKDC-202ENST00000338368 OR1E1P30953 314 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 CD151P48509 253 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 DAOAP59103 153 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 CRYBG2Q8N1P7 616 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 TEX9Q8N6V9 391 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 TRIM13O60858 407 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 ERVK-10P10266 1014 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 NDUFV1P49821 464 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 GDF10P55107 478 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 PDCD2Q16342 344 aaPredicted RBP6.44□□□□□ -1.38
PRKDC-202ENST00000338368 C15orf39Q6ZRI6 1047 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 CMASQ8NFW8 434 aaPredicted RBP6.44□□□□□ -1.38
PRKDC-202ENST00000338368 PRCCQ92733 491 aaPredicted RBP6.44□□□□□ -1.38
PRKDC-202ENST00000338368 ZYG11BQ9C0D3 744 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 CD248Q9HCU0 757 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 TBC1D13Q9NVG8 400 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 FSBPO95073 299 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 SCNN1BP51168 640 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 DDR2Q16832 855 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 PCID2Q5JVF3 399 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 TMEM63BQ5T3F8 832 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 LDLRAD1Q5T700 205 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 RAP1GAP2Q684P5 730 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 NDRG1Q92597 394 aaKnown RBP6.44□□□□□ -1.38
PRKDC-202ENST00000338368 SLCO2A1Q92959 643 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 CPNE1Q99829 537 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 PRKD2Q9BZL6 878 aa6.44□□□□□ -1.38
PRKDC-202ENST00000338368 OLA1Q9NTK5 396 aaKnown RBP6.44□□□□□ -1.38
PRKDC-202ENST00000338368 MYBPHLA2RUH7 354 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 EIF4E1BA6NMX2 242 aaKnown RBP6.43□□□□□ -1.38
PRKDC-202ENST00000338368 SNAI1O95863 264 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-202ENST00000338368 F2P00734 622 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 FASTKD3Q14CZ7 662 aaKnown RBP6.43□□□□□ -1.38
PRKDC-202ENST00000338368 SLC35F5Q8WV83 523 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 KAT2BQ92831 832 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 PCED1BQ96HM7 432 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 MRPL9Q9BYD2 267 aaKnown RBP6.43□□□□□ -1.38
PRKDC-202ENST00000338368 EFCAB1Q9HAE3 211 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 ATP11BQ9Y2G3 1177 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 FOXO6A8MYZ6 492 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 ATP6V1G2O95670 118 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 FAM187BQ17R55 369 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 UNKQ9C0B0 810 aaKnown RBP6.43□□□□□ -1.38
PRKDC-202ENST00000338368 CYP4F12Q9HCS2 524 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 HACD3Q9P035 362 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 FGF10O15520 208 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-202ENST00000338368 PTPN7P35236 360 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 MTA1Q13330 715 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 C16orf70Q9BSU1 422 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 UBXN6Q9BZV1 441 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 LMCD1Q9NZU5 365 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 FAM237BA0A1B0GVD1 139 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 H0Y626 953 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 AIM2O14862 343 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 OGDHQ02218 1023 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 SDHAF4Q5VUM1 108 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 LRRC49Q8IUZ0 686 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 FAM136AQ96C01 138 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 RCOR3Q9P2K3 495 aaPredicted RBP6.43□□□□□ -1.38
PRKDC-202ENST00000338368 PKP3Q9Y446 797 aa6.43□□□□□ -1.38
PRKDC-202ENST00000338368 NT5C1B-RDH14C9J2C7 533 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms