RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 CCDC68Q9H2F9 335 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 ANGPTL2Q9UKU9 493 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 TNFSF13BQ9Y275 285 aa8.44□□□□□ -1.06
HPS4-201ENST00000336873 DRG1Q9Y295 367 aaKnown RBP8.44□□□□□ -1.06
HPS4-201ENST00000336873 NEMP2A6NFY4 417 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 TRDMT1O14717 391 aaKnown RBP8.43□□□□□ -1.06
HPS4-201ENST00000336873 MDM4O15151 490 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 PLA2G6O60733 806 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 SLC25A27O95847 323 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 OR1G1P47890 313 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 CDH13P55290 713 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 MPP3Q13368 585 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 NOMO1Q15155 1222 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 FUT11Q495W5 492 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 LACTB2Q53H82 288 aaPredicted RBP8.43□□□□□ -1.06
HPS4-201ENST00000336873 SPDYAQ5MJ70 313 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 ARHGAP17Q68EM7 881 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 PDPK2PQ6A1A2 396 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 LRRC74BQ6ZQY2 392 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 RIPOR1Q6ZS17 1223 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 C2orf69Q8N8R5 385 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 NAT8LQ8N9F0 302 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 ZNF570Q96NI8 536 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 CSPG4P5Q96PW8 444 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 XPNPEP3Q9NQH7 507 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 PRDM5Q9NQX1 630 aaPredicted RBP8.43□□□□□ -1.06
HPS4-201ENST00000336873 NMRK1Q9NWW6 199 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 TMEM216Q9P0N5 145 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 AFF4Q9UHB7 1163 aaKnown RBP8.43□□□□□ -1.06
HPS4-201ENST00000336873 TK2O00142 265 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 TBX10O75333 385 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 GNAT1P11488 350 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 NFKB1P19838 968 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 IGFBP6P24592 240 aaPredicted RBP8.43□□□□□ -1.06
HPS4-201ENST00000336873 BCAT1P54687 386 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 HUNKP57058 714 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 SLC25A11Q02978 314 aaKnown RBP8.43□□□□□ -1.06
HPS4-201ENST00000336873 BST2Q10589 180 aaKnown RBP8.43□□□□□ -1.06
HPS4-201ENST00000336873 PDK1Q15118 436 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 CNGA3Q16281 694 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 NOMO2Q5JPE7 1267 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 LRRC8EQ6NSJ5 796 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 ABI1Q8IZP0 508 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 NKD2Q969F2 451 aaPredicted RBP8.43□□□□□ -1.06
HPS4-201ENST00000336873 KLHL5Q96PQ7 755 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 CDRT15Q96T59 188 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 FOXP3Q9BZS1 431 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 RMI1Q9H9A7 625 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 ASCC3Q8N3C0 2202 aaKnown RBP8.43□□□□□ -1.06
HPS4-201ENST00000336873 DPPA5A6NC42 116 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 C2CD4BA6NLJ0 364 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 BHMG1C9JSJ3 638 aaPredicted RBP8.43□□□□□ -1.06
HPS4-201ENST00000336873 TM9SF1O15321 606 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 EPHX2P34913 555 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 SPRP35270 261 aaPredicted RBP8.43□□□□□ -1.06
HPS4-201ENST00000336873 HDAC4P56524 1084 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 RNF43Q68DV7 783 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 KRT80Q6KB66 452 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 ZNF280DQ6N043 979 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 METTL23Q86XA0 190 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 ATPAF2Q8N5M1 289 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.43□□□□□ -1.06
HPS4-201ENST00000336873 KCTD4Q8WVF5 259 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 HBEGFQ99075 208 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 SEPT5Q99719 369 aaPredicted RBP8.43□□□□□ -1.06
HPS4-201ENST00000336873 FICDQ9BVA6 458 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 SLC5A4Q9NY91 659 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 OR12D3Q9UGF7 316 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 MCM8Q9UJA3 840 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 UBQLN1Q9UMX0 589 aaKnown RBP8.43□□□□□ -1.06
HPS4-201ENST00000336873 NENFQ9UMX5 172 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 SLX4Q8IY92 1834 aa8.43□□□□□ -1.06
HPS4-201ENST00000336873 NFASCO94856 1347 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 MYBPHLA2RUH7 354 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 SRRM3A6NNA2 597 aaPredicted RBP8.42□□□□□ -1.06
HPS4-201ENST00000336873 ERI2A8K979 691 aaKnown RBP8.42□□□□□ -1.06
HPS4-201ENST00000336873 IRF1P10914 325 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 EEF1B2P24534 225 aaKnown RBP8.42□□□□□ -1.06
HPS4-201ENST00000336873 CHRNA4P43681 627 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 AFF1P51825 1210 aaKnown RBP8.42□□□□□ -1.06
HPS4-201ENST00000336873 IRF9Q00978 393 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 YWHAHQ04917 246 aaPredicted RBP8.42□□□□□ -1.06
HPS4-201ENST00000336873 TBL3Q12788 808 aaKnown RBP8.42□□□□□ -1.06
HPS4-201ENST00000336873 MED21Q13503 144 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 LRRC23Q53EV4 343 aaPredicted RBP8.42□□□□□ -1.06
HPS4-201ENST00000336873 SLC45A4Q5BKX6 768 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 SLC27A1Q6PCB7 646 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 MTHFD1LQ6UB35 978 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 SNX32Q86XE0 403 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 PIWIL2Q8TC59 973 aaKnown RBP8.42□□□□□ -1.06
HPS4-201ENST00000336873 SLC44A1Q8WWI5 657 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 KHSRPQ92945 711 aaKnown RBP eCLIP8.42□□□□□ -1.06
HPS4-201ENST00000336873 FGD4Q96M96 766 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 EPAS1Q99814 870 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 EBNA1BP2Q99848 306 aaKnown RBP8.42□□□□□ -1.06
HPS4-201ENST00000336873 OXCT2Q9BYC2 517 aaPredicted RBP8.42□□□□□ -1.06
HPS4-201ENST00000336873 SPC25Q9HBM1 224 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 NT5MQ9NPB1 228 aa8.42□□□□□ -1.06
HPS4-201ENST00000336873 DDX18Q9NVP1 670 aaKnown RBP8.42□□□□□ -1.06
HPS4-201ENST00000336873 RBM22Q9NW64 420 aaKnown RBP eCLIP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms