RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 PCDH19Q8TAB3 1148 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZCCHC14Q8WYQ9 949 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZFP42Q96MM3 310 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 RPRD1AQ96P16 312 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLC22A4Q9H015 551 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZNF700Q9H0M5 742 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 SEC14L3Q9UDX4 400 aa6.19□□□□□ -1.42
CDC42BPA-201ENST00000334218 A2ML1A8K2U0 1454 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 LOC100506127A0A0U1RQW1 187 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 SEC24DO94855 1032 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 APBA3O96018 575 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 PGK1P00558 417 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 GNAI2P04899 355 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 PTPN1P18031 435 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 ANXA13P27216 316 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 GNRHRP30968 328 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 SKP1P63208 163 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 AKAP4Q5JQC9 854 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 PGM2L1Q6PCE3 622 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 BEND5Q7L4P6 421 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 PHACTR1Q9C0D0 580 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 WDR6Q9NNW5 1121 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 DUSP22Q9NRW4 184 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 PNMA3Q9UL41 463 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 DISP3Q9P2K9 1392 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 MAGEB17A8MXT2 336 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 TPST2O60704 377 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 VAMP4O75379 141 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 NPTXRO95502 500 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 RPLP2P05387 115 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 PVALBP20472 110 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 HSD3B2P26439 372 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 RBL1P28749 1068 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 ATPAF1Q5TC12 328 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 COX15Q7KZN9 410 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 GALNTL5Q7Z4T8 443 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 MPP5Q8N3R9 675 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 NUP85Q9BW27 656 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 NUAK2Q9H093 628 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 DCAF16Q9NXF7 216 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 ABCC1P33527 1531 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 IRGMA1A4Y4 181 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 CAPN8A6NHC0 703 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 AGAP5A6NIR3 686 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 A8MVJ9 347 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 KERAO60938 352 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 CNOT4O95628 575 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 SERPING1P05155 500 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 AKT1P31749 480 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 BPIFB4P59827 614 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 PDE4DQ08499 809 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 C2orf76Q3KRA6 126 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 NEK8Q86SG6 692 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 C1orf52Q8N6N3 182 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 RNF145Q96MT1 663 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 SYT4Q9H2B2 425 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 SRA1Q9HD15 236 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 PPP1R2P9O14990 202 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 KIAA0355O15063 1070 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZBTB24O43167 697 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZBTB14O43829 449 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 BPNT1O95861 308 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 PDHBP11177 359 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 CYP2C9P11712 490 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 PORP16435 677 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 EIF4A1P60842 406 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 TSPAN5P62079 268 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 NIPAL4Q0D2K0 466 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 C4orf17Q53FE4 359 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 BRDTQ58F21 947 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 TGIF2LXQ8IUE1 241 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 PPP1R2P1Q96PQ5 205 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 C3orf14Q9HBI5 128 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 RGS18Q9NS28 235 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 PLA2G4CQ9UP65 541 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLC30A1Q9Y6M5 507 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 MROH7Q68CQ1 1323 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 LOC100653049A0A140TA62 436 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 PHGDHO43175 533 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 LATO43561 262 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 KRT34O76011 436 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 CD9P21926 228 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 PPP2R1BP30154 601 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 ALDH3A2P51648 485 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 KCTD16Q68DU8 428 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 FAM111BQ6SJ93 734 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 CABP7Q86V35 215 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 SCUBE3Q8IX30 993 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZNF507Q8TCN5 953 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 DYNLL2Q96FJ2 89 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 CCT8L2Q96SF2 557 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 ABCD2Q9UBJ2 740 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 PZPP20742 1482 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 H3BMM5 538 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 STK17BO94768 372 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 CYP2C18P33260 490 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 TPTEP56180 551 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 STXBP1P61764 594 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 CHRNA2Q15822 529 aa6.18□□□□□ -1.42
CDC42BPA-201ENST00000334218 TAZQ16635 292 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms