RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 FAM124BQ9H5Z6 455 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-201ENST00000334136 ASAH2Q9NR71 780 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 PTPRJQ12913 1337 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 KRT16P08779 473 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 NNMTP40261 264 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 SESN2P58004 480 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-201ENST00000334136 ADAM17P78536 824 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 AUHQ13825 339 aaKnown RBP12.12□□□□□ -0.47
HDAC6-201ENST00000334136 FAXCQ5TGI0 409 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 LCLAT1Q6UWP7 414 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 GALNT4Q8N4A0 578 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 GPR152Q8TDT2 470 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 AUTS2Q8WXX7 1259 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 EFHD1Q9BUP0 239 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 RHBDL2Q9NX52 303 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-201ENST00000334136 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-201ENST00000334136 HNRNPCL1O60812 293 aaKnown RBP12.12□□□□□ -0.47
HDAC6-201ENST00000334136 ENTPD5O75356 428 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 FGF18O76093 207 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 CDK7P50613 346 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 ROR1Q01973 937 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 SOX4Q06945 474 aaPredicted RBP12.12□□□□□ -0.47
HDAC6-201ENST00000334136 STX3Q13277 289 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 KCNT1Q5JUK3 1230 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 ZNF697Q5TEC3 545 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 HERC6Q8IVU3 1022 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 ZC3H3Q8IXZ2 948 aaKnown RBP12.12□□□□□ -0.47
HDAC6-201ENST00000334136 SLC4A11Q8NBS3 891 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 SNRNP27Q8WVK2 155 aaKnown RBP12.12□□□□□ -0.47
HDAC6-201ENST00000334136 MYLK2Q9H1R3 596 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 DPEP3Q9H4B8 488 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 CHST7Q9NS84 486 aa12.12□□□□□ -0.47
HDAC6-201ENST00000334136 ZC3H7BQ9UGR2 993 aaKnown RBP12.12□□□□□ -0.47
HDAC6-201ENST00000334136 MRPS23Q9Y3D9 190 aaKnown RBP12.12□□□□□ -0.47
HDAC6-201ENST00000334136 PABPN1LA6NDY0 278 aaKnown RBP12.11□□□□□ -0.47
HDAC6-201ENST00000334136 FOXO6A8MYZ6 492 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 PTGESO14684 152 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 MYL2P10916 166 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 TCN1P20061 433 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-201ENST00000334136 XPAP23025 273 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-201ENST00000334136 WDR5P61964 334 aaKnown RBP12.11□□□□□ -0.47
HDAC6-201ENST00000334136 DEFB103AP81534 67 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 MROH9Q5TGP6 573 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 CMTR2Q8IYT2 770 aaKnown RBP12.11□□□□□ -0.47
HDAC6-201ENST00000334136 NDUFAF2Q8N183 169 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 BHMTQ93088 406 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 CDK5RAP1Q96SZ6 601 aaKnown RBP12.11□□□□□ -0.47
HDAC6-201ENST00000334136 TMEM121Q9BTD3 319 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 SLCO1B3Q9NPD5 702 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 A8MUI8 341 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 SUPT3HO75486 399 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 RECQLP46063 649 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-201ENST00000334136 PRPSAP1Q14558 356 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 NUDT18Q6ZVK8 323 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 RCOR2Q8IZ40 523 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 FAM71DQ8N9W8 422 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 PCED1BQ96HM7 432 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 IGSF21Q96ID5 467 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 RRN3Q9NYV6 651 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 ARMCX1Q9P291 453 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 MTO1Q9Y2Z2 717 aaKnown RBP12.11□□□□□ -0.47
HDAC6-201ENST00000334136 TRIM49D1C9J1S8 452 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 PIRO00625 290 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 KCNN4O15554 427 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 ZFXP17010 805 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-201ENST00000334136 ASPAP45381 313 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 NOMO3P69849 1222 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 IL1RL1Q01638 556 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 OCRLQ01968 901 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 HGSNATQ68CP4 663 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 CCSAPQ6IQ19 270 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-201ENST00000334136 PPP1R10Q96QC0 940 aaKnown RBP12.11□□□□□ -0.47
HDAC6-201ENST00000334136 OLA1Q9NTK5 396 aaKnown RBP12.11□□□□□ -0.47
HDAC6-201ENST00000334136 GDAP2Q9NXN4 497 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 WHRNQ9P202 907 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 KIAA1217Q5T5P2 1943 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 EEF2KO00418 725 aaKnown RBP12.11□□□□□ -0.47
HDAC6-201ENST00000334136 AIM2O14862 343 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 XPO1O14980 1071 aaKnown RBP12.11□□□□□ -0.47
HDAC6-201ENST00000334136 DDHD2O94830 711 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 SNUPNO95149 360 aaKnown RBP12.11□□□□□ -0.47
HDAC6-201ENST00000334136 CHI3L2Q15782 390 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 FSCBQ5H9T9 825 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 EXOC3L1Q86VI1 746 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 SPATA18Q8TC71 538 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 ALG3Q92685 438 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 BORCS6Q96GS4 357 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 RPRD1AQ96P16 312 aaPredicted RBP12.11□□□□□ -0.47
HDAC6-201ENST00000334136 POPDC2Q9HBU9 364 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 TBX21Q9UL17 535 aa12.11□□□□□ -0.47
HDAC6-201ENST00000334136 CCDC78A2IDD5 438 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 KIAA0355O15063 1070 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 PPM1FP49593 454 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-201ENST00000334136 KPNA1P52294 538 aaPredicted RBP12.1□□□□□ -0.47
HDAC6-201ENST00000334136 RABGGTBP53611 331 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 CACNA2D1P54289 1103 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 GEMIN4P57678 1058 aaKnown RBP12.1□□□□□ -0.47
HDAC6-201ENST00000334136 SLC12A1Q13621 1099 aa12.1□□□□□ -0.47
HDAC6-201ENST00000334136 PRELID2Q8N945 189 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms