RNA–Protein interactions for RNA: ENST00000333990.10

POLR1B-202, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 4,376 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-202ENST00000333990 ITGB4P16144 1822 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 ERCC2P18074 760 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 RBL1P28749 1068 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 GP5P40197 560 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 PTPN20Q4JDL3 420 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 SPANXN3Q5MJ09 141 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 PDPK2PQ6A1A2 396 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 RFX8Q6ZV50 586 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 FAM228AQ86W67 206 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 TDRD5Q8NAT2 981 aaKnown RBP11.48□□□□□ -0.57
POLR1B-202ENST00000333990 SLC26A7Q8TE54 656 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 SCLYQ96I15 445 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 TACO1Q9BSH4 297 aaKnown RBP11.48□□□□□ -0.57
POLR1B-202ENST00000333990 BBS2Q9BXC9 721 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 MFSD1Q9H3U5 465 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 L1RE1Q9UN81 338 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 ARL2BPQ9Y2Y0 163 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 TMEM191CA6NGB0 347 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 TCP11X1B4DZS4 312 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 IFRD1O00458 451 aaPredicted RBP11.48□□□□□ -0.57
POLR1B-202ENST00000333990 CHN1P15882 459 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 PBX1P40424 430 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 SESN3P58005 492 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 SULT2A1Q06520 285 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 ITGA9Q13797 1035 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 HIBCHQ6NVY1 386 aaPredicted RBP11.48□□□□□ -0.57
POLR1B-202ENST00000333990 SPATA21Q7Z572 469 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 PSTKQ8IV42 348 aaKnown RBP11.48□□□□□ -0.57
POLR1B-202ENST00000333990 RNF217Q8TC41 542 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 ZBTB10Q96DT7 871 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 FAR2Q96K12 515 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 PANX3Q96QZ0 392 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 ALG13Q9NP73 1137 aaKnown RBP11.48□□□□□ -0.57
POLR1B-202ENST00000333990 CLCA2Q9UQC9 943 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 EFR3BQ9Y2G0 817 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 CLDN11O75508 207 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 PGAM1P18669 254 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 MSH3P20585 1137 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 TAF11Q15544 211 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 SERPINA13PQ6UXR4 307 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 FAM9CQ8IZT9 166 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 STK40Q8N2I9 435 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 EIF1ADQ8N9N8 165 aaKnown RBP11.48□□□□□ -0.57
POLR1B-202ENST00000333990 VPS37AQ8NEZ2 397 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 OR2W6PQ8NHA6 318 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 AGR3Q8TD06 166 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 KLF6Q99612 283 aaPredicted RBP11.48□□□□□ -0.57
POLR1B-202ENST00000333990 PRPF18Q99633 342 aaKnown RBP11.48□□□□□ -0.57
POLR1B-202ENST00000333990 WRAP73Q9P2S5 460 aaPredicted RBP11.48□□□□□ -0.57
POLR1B-202ENST00000333990 ANGPTL2Q9UKU9 493 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 ZMYND8Q9ULU4 1186 aaPredicted RBP11.48□□□□□ -0.57
POLR1B-202ENST00000333990 ASB3Q9Y575 518 aa11.48□□□□□ -0.57
POLR1B-202ENST00000333990 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.47□□□□□ -0.57
POLR1B-202ENST00000333990 ANGPT2O15123 496 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 FGFR1P11362 822 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 ADRA1BP35368 520 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 RAD23BP54727 409 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 RPL7AP62424 266 aaKnown RBP11.47□□□□□ -0.57
POLR1B-202ENST00000333990 NAB1Q13506 487 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 GPR158Q5T848 1215 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 SDHAF4Q5VUM1 108 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 TPGS2Q68CL5 300 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 ARHGAP17Q68EM7 881 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 PLEKHA7Q6IQ23 1121 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 LLGL2Q6P1M3 1020 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 LVRNQ6Q4G3 990 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 GLT6D1Q7Z4J2 308 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 EMID1Q96A84 441 aaPredicted RBP11.47□□□□□ -0.57
POLR1B-202ENST00000333990 TBL1YQ9BQ87 522 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 TMEM175Q9BSA9 504 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 RNF112Q9ULX5 631 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 GABRQQ9UN88 632 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 A0A1W2PQ45 241 aaPredicted RBP11.47□□□□□ -0.57
POLR1B-202ENST00000333990 A0A1W2PQY0 241 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 TBL1XO60907 577 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 KRT16P08779 473 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 IL1RL1Q01638 556 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 FAM46CQ5VWP2 391 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 SCARA3Q6AZY7 606 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 C17orf99Q6UX52 265 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 SETD3Q86TU7 594 aaPredicted RBP11.47□□□□□ -0.57
POLR1B-202ENST00000333990 FCRL2Q96LA5 508 aaPredicted RBP11.47□□□□□ -0.57
POLR1B-202ENST00000333990 PAFAH2Q99487 392 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 IL22Q9GZX6 179 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 ATP13A3Q9H7F0 1226 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 GPAMQ9HCL2 828 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 KCND1Q9NSA2 647 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 SNCBQ16143 134 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 CDCA2Q69YH5 1023 aaPredicted RBP11.47□□□□□ -0.57
POLR1B-202ENST00000333990 FBXO46Q6PJ61 603 aaPredicted RBP11.47□□□□□ -0.57
POLR1B-202ENST00000333990 RBM23Q86U06 439 aaKnown RBP11.47□□□□□ -0.57
POLR1B-202ENST00000333990 PAWRQ96IZ0 340 aaKnown RBP11.47□□□□□ -0.57
POLR1B-202ENST00000333990 PRDM12Q9H4Q4 367 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 NHSQ6T4R5 1651 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 C4AP0C0L4 1744 aa11.47□□□□□ -0.57
POLR1B-202ENST00000333990 TRPC5OSA6NMA1 111 aa11.46□□□□□ -0.57
POLR1B-202ENST00000333990 TRIM16O95361 564 aa11.46□□□□□ -0.57
POLR1B-202ENST00000333990 PTPN7P35236 360 aa11.46□□□□□ -0.57
POLR1B-202ENST00000333990 SERPINH1P50454 418 aaKnown RBP11.46□□□□□ -0.57
POLR1B-202ENST00000333990 SLC5A3P53794 718 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms