RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 BNIP2Q12982 314 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 COASYQ13057 564 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 NUDT18Q6ZVK8 323 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 ZNF420Q8TAQ5 688 aaPredicted RBP10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 RAD54LQ92698 747 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 ASB2Q96Q27 587 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 SLC35C2Q9NQQ7 365 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 CDH9Q9ULB4 789 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 PEX16Q9Y5Y5 336 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 TPRP12270 2363 aaKnown RBP10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 PLA2R1Q13018 1463 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 ILVBLA1L0T0 632 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 TEX46H3BTG2 121 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 NTRK1P04629 796 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 SERPINE1P05121 402 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 ZNF24P17028 368 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 MMP13P45452 471 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 SH3D19Q5HYK7 790 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 LHFPL3Q86UP9 236 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 FAM228AQ86W67 206 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 MED28Q9H204 178 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 MGAT4AQ9UM21 535 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 SNX9Q9Y5X1 595 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 MAPK1P28482 360 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 VAMP7P51809 220 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 CIDECQ96AQ7 238 aaPredicted RBP10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 WWOXQ9NZC7 414 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 IQGAP1P46940 1657 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 IRGMA1A4Y4 181 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 H3BN98 237 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 TMCC2O75069 709 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 BMP10O95393 424 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 P4HBP07237 508 aaKnown RBP10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 RALAP11233 206 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 ZRANB3Q5FWF4 1079 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 OTUD3Q5T2D3 398 aaPredicted RBP10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 KBTBD2Q8IY47 623 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 HM13Q8TCT9 377 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 IGSF9Q9P2J2 1179 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 NCF1BA6NI72 391 aaPredicted RBP10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 NCF1CA8MVU1 366 aaPredicted RBP10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 GLI1P08151 1106 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 NCF1P14598 390 aaPredicted RBP10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 RPA1P27694 616 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 SLC1A6P48664 564 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 PTK6Q13882 451 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 SWI5Q1ZZU3 235 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 C1orf189Q5VU69 101 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 ZNF438Q7Z4V0 828 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 DEPDC4Q8N2C3 294 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 CMTM6Q9NX76 183 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 RPH3AQ9Y2J0 694 aaPredicted RBP10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 CACNA1CQ13936 2221 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 FANCAO15360 1455 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 SLC22A1O15245 554 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 RBMXL2O75526 392 aaKnown RBP10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 PRKD3O94806 890 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 MYL3P08590 195 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 HNF4AP41235 474 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 BTDP43251 543 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 GALCP54803 685 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 YAF2Q8IY57 180 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 TMEM9Q9P0T7 183 aa10.54□□□□□ -0.72
SPTBN1-201ENST00000333896 ESPL1Q14674 2120 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 FBP2O00757 339 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 HLA-DQA2P01906 255 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 ABHD2P08910 425 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 PAEPP09466 180 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 PRKAR2AP13861 404 aaKnown RBP10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 SFNP31947 248 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 THNSL1Q8IYQ7 743 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 BHLHE22Q8NFJ8 381 aaPredicted RBP10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 DCAF5Q96JK2 942 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 CELF4Q9BZC1 486 aaKnown RBP10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 ENTPD5O75356 428 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 PTSQ03393 145 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 NCAPD2Q15021 1401 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 CYP4V2Q6ZWL3 525 aaPredicted RBP10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 SIPA1Q96FS4 1042 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 RMDN3Q96TC7 470 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 PREBQ9HCU5 417 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 AKAP8O43823 692 aaKnown RBP10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 UCHL3P15374 230 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 HOXA13P31271 388 aaPredicted RBP10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 ZNF829Q3KNS6 432 aaPredicted RBP10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 ZNF613Q6PF04 617 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 SLC26A11Q86WA9 606 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 TRIM48Q8IWZ4 208 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 PQLC1Q8N2U9 271 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 PGBD3Q8N328 593 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 SPATA18Q8TC71 538 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 COA7Q96BR5 231 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 TBATAQ96M53 351 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 CAMKK2Q96RR4 588 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 ZSWIM1Q9BR11 485 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 SLC25A23Q9BV35 468 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 GLS2Q9UI32 602 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 PSMD13Q9UNM6 376 aa10.53□□□□□ -0.72
SPTBN1-201ENST00000333896 TDRKHQ9Y2W6 561 aaKnown RBP10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms