RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 GAB3Q8WWW8 586 aa14.81□□□□□ -0.04
SNX20-202ENST00000330943 USP13Q92995 863 aaPredicted RBP14.81□□□□□ -0.04
SNX20-202ENST00000330943 TMEM176AQ96HP8 235 aa14.81□□□□□ -0.04
SNX20-202ENST00000330943 ZNF668Q96K58 619 aaPredicted RBP14.81□□□□□ -0.04
SNX20-202ENST00000330943 BCO2Q9BYV7 579 aa14.81□□□□□ -0.04
SNX20-202ENST00000330943 TCF7L2Q9NQB0 619 aa14.81□□□□□ -0.04
SNX20-202ENST00000330943 PCDHB12Q9Y5F1 795 aa14.81□□□□□ -0.04
SNX20-202ENST00000330943 AK5Q9Y6K8 562 aa14.81□□□□□ -0.04
SNX20-202ENST00000330943 SPATA31C2B4DYI2 1134 aa14.81□□□□□ -0.04
SNX20-202ENST00000330943 H3BSA7 217 aa14.81□□□□□ -0.04
SNX20-202ENST00000330943 CYP2F1P24903 491 aa14.81□□□□□ -0.04
SNX20-202ENST00000330943 PIK3R1P27986 724 aa14.81□□□□□ -0.04
SNX20-202ENST00000330943 COG7P83436 770 aa14.81□□□□□ -0.04
SNX20-202ENST00000330943 SLC10A2Q12908 348 aaPredicted RBP14.81□□□□□ -0.04
SNX20-202ENST00000330943 STEAP4Q687X5 459 aa14.81□□□□□ -0.04
SNX20-202ENST00000330943 NAPRTQ6XQN6 538 aa14.81□□□□□ -0.04
SNX20-202ENST00000330943 BNC2Q6ZN30 1099 aaPredicted RBP14.81□□□□□ -0.04
SNX20-202ENST00000330943 DSELQ8IZU8 1212 aa14.81□□□□□ -0.04
SNX20-202ENST00000330943 BHLHE22Q8NFJ8 381 aaPredicted RBP14.81□□□□□ -0.04
SNX20-202ENST00000330943 PRPF19Q9UMS4 504 aaKnown RBP14.81□□□□□ -0.04
SNX20-202ENST00000330943 MYO18AQ92614 2054 aaKnown RBP14.8□□□□□ -0.04
SNX20-202ENST00000330943 A0A1B0GTW7 788 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 ALDH1A2O94788 518 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 MGAT1P26572 445 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 DCTN2Q13561 401 aaKnown RBP14.8□□□□□ -0.04
SNX20-202ENST00000330943 APOFQ13790 326 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 PDK1Q15118 436 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 TMEM132AQ24JP5 1023 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 ACBD5Q5T8D3 534 aaPredicted RBP14.8□□□□□ -0.04
SNX20-202ENST00000330943 KCNT2Q6UVM3 1135 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 CES3Q6UWW8 571 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 C16orf89Q6UX73 402 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 C4orf22Q6V702 233 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 TSHZ1Q6ZSZ6 1077 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 ZNF410Q86VK4 478 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 KYQ8NBH2 561 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 ADCY4Q8NFM4 1077 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 LZICQ8WZA0 190 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 PKP2Q99959 881 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 WDR55Q9H6Y2 383 aaPredicted RBP14.8□□□□□ -0.04
SNX20-202ENST00000330943 SIX4Q9UIU6 781 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 TRMUO75648 421 aaKnown RBP14.8□□□□□ -0.04
SNX20-202ENST00000330943 THRAP10827 490 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 NR1H2P55055 460 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 SEMA5AQ13591 1074 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 CYTH1Q15438 398 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 HEATR6Q6AI08 1181 aaKnown RBP14.8□□□□□ -0.04
SNX20-202ENST00000330943 ZFP1Q6P2D0 407 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 TICAM1Q8IUC6 712 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 TDRD5Q8NAT2 981 aaKnown RBP14.8□□□□□ -0.04
SNX20-202ENST00000330943 DDI1Q8WTU0 396 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 PLEKHG4BQ96PX9 1271 aa14.8□□□□□ -0.04
SNX20-202ENST00000330943 CILPO75339 1184 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 F7P08709 466 aaPredicted RBP14.79□□□□□ -0.04
SNX20-202ENST00000330943 CXCL8P10145 99 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 ERVK-10P10266 1014 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 ENO3P13929 434 aaPredicted RBP14.79□□□□□ -0.04
SNX20-202ENST00000330943 EFNA5P52803 228 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 INSCQ1MX18 579 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 CYS1Q717R9 158 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 NIM1KQ8IY84 436 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 RNF149Q8NC42 400 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 ADAM32Q8TC27 787 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 MAGEB5Q9BZ81 275 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 ACSS2Q9NR19 701 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 SNX15Q9NRS6 342 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 NOP56O00567 594 aaKnown RBP14.79□□□□□ -0.04
SNX20-202ENST00000330943 AMHP03971 560 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 ITGB3P05106 788 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 SERPINB8P50452 374 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 EMP3P54852 163 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 MS4A2Q01362 244 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 ZNF423Q2M1K9 1284 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 TMEM192Q8IY95 271 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 PLD6Q8N2A8 252 aaKnown RBP14.79□□□□□ -0.04
SNX20-202ENST00000330943 SNRNP27Q8WVK2 155 aaKnown RBP14.79□□□□□ -0.04
SNX20-202ENST00000330943 KBTBD7Q8WVZ9 684 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 RCN3Q96D15 328 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 ZNF670Q9BS34 389 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 NIFKQ9BYG3 293 aaKnown RBP14.79□□□□□ -0.04
SNX20-202ENST00000330943 SH3BP1Q9Y3L3 701 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 MAGEB3O15480 346 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 CDH2P19022 906 aaPredicted RBP14.79□□□□□ -0.04
SNX20-202ENST00000330943 GLDCP23378 1020 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 SDC4P31431 198 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 CEACAM7Q14002 265 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 PIGGQ5H8A4 983 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 C1orf127Q8N9H9 656 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 MOCOSQ96EN8 888 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 PGLYRP2Q96PD5 576 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 FERMT1Q9BQL6 677 aa14.79□□□□□ -0.04
SNX20-202ENST00000330943 DHX35Q9H5Z1 703 aaKnown RBP14.79□□□□□ -0.04
SNX20-202ENST00000330943 RGSL1A5PLK6 1076 aa14.78□□□□□ -0.04
SNX20-202ENST00000330943 B4GALT4O60513 344 aa14.78□□□□□ -0.04
SNX20-202ENST00000330943 NFICP08651 508 aa14.78□□□□□ -0.04
SNX20-202ENST00000330943 TCN1P20061 433 aaPredicted RBP14.78□□□□□ -0.04
SNX20-202ENST00000330943 CYP3A5P20815 502 aa14.78□□□□□ -0.04
SNX20-202ENST00000330943 MLH1P40692 756 aa14.78□□□□□ -0.04
SNX20-202ENST00000330943 PPIDQ08752 370 aaKnown RBP14.78□□□□□ -0.04
SNX20-202ENST00000330943 CCDC153Q494R4 210 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms