RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 RNF157Q96PX1 679 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 COG4Q9H9E3 785 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 CD274Q9NZQ7 290 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 EGFL7Q9UHF1 273 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 PSMD13Q9UNM6 376 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 NDUFS3O75489 264 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 FDX1P10109 184 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 CSE1LP55060 971 aaKnown RBP14.35□□□□□ -0.11
EPHB3-201ENST00000330394 PSME3P61289 254 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 KLF10Q13118 480 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 KRT72Q14CN4 511 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 MTX3Q5HYI7 312 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 DPY19L2Q6NUT2 758 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 LENG8Q96PV6 779 aaPredicted RBP14.35□□□□□ -0.11
EPHB3-201ENST00000330394 GLIS2Q9BZE0 524 aaPredicted RBP14.35□□□□□ -0.11
EPHB3-201ENST00000330394 PRMT7Q9NVM4 692 aaPredicted RBP14.35□□□□□ -0.11
EPHB3-201ENST00000330394 SCN3BQ9NY72 215 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 CNTNAP4Q9C0A0 1308 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 CFAP99D6REC4 459 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 PIK3R1P27986 724 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 ZNF618Q5T7W0 954 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 APBB2Q92870 758 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 OTUD5Q96G74 571 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 ZNF560Q96MR9 790 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 NSMCE4AQ9NXX6 385 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 SELENONQ9NZV5 590 aa14.35□□□□□ -0.11
EPHB3-201ENST00000330394 ABCC6O95255 1503 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 PSMD12O00232 456 aaPredicted RBP14.34□□□□□ -0.11
EPHB3-201ENST00000330394 HDAC3O15379 428 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 ARHGEF9O43307 516 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 HNRNPLP14866 589 aaKnown RBP eCLIP14.34□□□□□ -0.11
EPHB3-201ENST00000330394 TCF4P15884 667 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 TMC5Q6UXY8 1006 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 ARCQ7LC44 396 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 BRSK2Q8IWQ3 736 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 BLOC1S5Q8TDH9 187 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 MFN2O95140 757 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 PGAM1P18669 254 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 GRIA4P48058 902 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 MMP14P50281 582 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 LPIN1Q14693 890 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 TRAF7Q6Q0C0 670 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 BANPQ8N9N5 519 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 KLHL23Q8NBE8 558 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 TNIP2Q8NFZ5 429 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 DCPSQ96C86 337 aaKnown RBP14.34□□□□□ -0.11
EPHB3-201ENST00000330394 LRRC39Q96DD0 335 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 SNRNP25Q9BV90 132 aaKnown RBP14.34□□□□□ -0.11
EPHB3-201ENST00000330394 ACE2Q9BYF1 805 aaPredicted RBP14.34□□□□□ -0.11
EPHB3-201ENST00000330394 MRPS26Q9BYN8 205 aaKnown RBP14.34□□□□□ -0.11
EPHB3-201ENST00000330394 SPATA31A5Q5VU36 1347 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 SPATA31A7Q8IWB4 1347 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 CAMTA1Q9Y6Y1 1673 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 TMEM63AO94886 807 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 WDR47O94967 919 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 RAP1GDS1P52306 607 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 IL5RAQ01344 420 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 GRIK3Q13003 919 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 NR1D2Q14995 579 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 PTPN20Q4JDL3 420 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 ZNF470Q6ECI4 717 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 NANOGNBQ7Z5D8 188 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 ZNF280CQ8ND82 737 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 AFG1LQ8WV93 481 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 PLGRKTQ9HBL7 147 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 C6orf203Q9P0P8 240 aaPredicted RBP14.34□□□□□ -0.11
EPHB3-201ENST00000330394 POMPQ9Y244 141 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 ANKRD12Q6UB98 2062 aa14.34□□□□□ -0.11
EPHB3-201ENST00000330394 MAGEB2O15479 319 aa14.33□□□□□ -0.11
EPHB3-201ENST00000330394 UGT1A9O60656 530 aa14.33□□□□□ -0.11
EPHB3-201ENST00000330394 LDLRP01130 860 aa14.33□□□□□ -0.11
EPHB3-201ENST00000330394 CDKN2BP42772 138 aa14.33□□□□□ -0.11
EPHB3-201ENST00000330394 DLG1Q12959 904 aa14.33□□□□□ -0.11
EPHB3-201ENST00000330394 RALGDSQ12967 914 aa14.33□□□□□ -0.11
EPHB3-201ENST00000330394 TXNRD3NBQ6F5E7 133 aa14.33□□□□□ -0.11
EPHB3-201ENST00000330394 TRMT10BQ6PF06 316 aaKnown RBP14.33□□□□□ -0.11
EPHB3-201ENST00000330394 FICDQ9BVA6 458 aa14.33□□□□□ -0.11
EPHB3-201ENST00000330394 WDCPQ9H6R7 721 aa14.33□□□□□ -0.11
EPHB3-201ENST00000330394 NOL11Q9H8H0 719 aaKnown RBP14.33□□□□□ -0.11
EPHB3-201ENST00000330394 UGT1A7Q9HAW7 530 aa14.33□□□□□ -0.11
EPHB3-201ENST00000330394 UGT1A10Q9HAW8 530 aa14.33□□□□□ -0.11
EPHB3-201ENST00000330394 UGT1A8Q9HAW9 530 aa14.33□□□□□ -0.11
EPHB3-201ENST00000330394 LRCH4O75427 683 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 TIPRLO75663 272 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 VTNP04004 478 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 NR4A1P22736 598 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 HOXD13P35453 343 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 ACTR3P61158 418 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 SLC15A2Q16348 729 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 GRTP1Q5TC63 336 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 TAF2Q6P1X5 1199 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 URGCPQ8TCY9 931 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 CERS2Q96G23 380 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 ADAM7Q9H2U9 754 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 LATS2Q9NRM7 1088 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 SYNDIG1LA6NDD5 238 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 ATXN8OSP0DMR3 200 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 MYL4P12829 197 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 HLA-DPA1P20036 260 aa14.33□□□□□ -0.12
EPHB3-201ENST00000330394 CHRM3P20309 590 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms