RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 ALDOAP04075 364 aaKnown RBP14.95□□□□□ -0.02
TPM3-206ENST00000330188 CTSHP09668 335 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 HCAR3P49019 387 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 SCNN1GP51170 649 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 HUNKP57058 714 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 TPI1P60174 286 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 ZBTB16Q05516 673 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 OLIG2Q13516 323 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 GDF6Q6KF10 455 aaPredicted RBP14.95□□□□□ -0.02
TPM3-206ENST00000330188 RASAL3Q86YV0 1011 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 TRPV1Q8NER1 839 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 ACMSDQ8TDX5 336 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 MIPEPQ99797 713 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 PAAF1Q9BRP4 392 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 TUBB6Q9BUF5 446 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 SENP6Q9GZR1 1112 aaPredicted RBP14.95□□□□□ -0.02
TPM3-206ENST00000330188 ZNF395Q9H8N7 513 aaPredicted RBP14.95□□□□□ -0.02
TPM3-206ENST00000330188 DDIT4Q9NX09 232 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 NOP53Q9NZM5 478 aaKnown RBP14.95□□□□□ -0.02
TPM3-206ENST00000330188 KLHL8Q9P2G9 620 aaPredicted RBP14.95□□□□□ -0.02
TPM3-206ENST00000330188 PSAT1Q9Y617 370 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 ARL5CA6NH57 179 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 CASTOR2A6NHX0 329 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 DUSP11O75319 330 aaKnown RBP14.95□□□□□ -0.02
TPM3-206ENST00000330188 GSRP00390 522 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 CHRNA1P02708 482 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 PPIDQ08752 370 aaKnown RBP14.95□□□□□ -0.02
TPM3-206ENST00000330188 HSF5Q4G112 596 aaPredicted RBP14.95□□□□□ -0.02
TPM3-206ENST00000330188 STXBP5Q5T5C0 1151 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 FAM91A1Q658Y4 838 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 KYAT3Q6YP21 454 aaKnown RBP14.95□□□□□ -0.02
TPM3-206ENST00000330188 PDZD4Q76G19 769 aaPredicted RBP14.95□□□□□ -0.02
TPM3-206ENST00000330188 TTC7BQ86TV6 843 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 NPWQ8N729 165 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.95□□□□□ -0.02
TPM3-206ENST00000330188 SOCS4Q8WXH5 440 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 NSL1Q96IY1 281 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 RHOBTB2Q9BYZ6 727 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 C20orf27Q9GZN8 174 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 CHST12Q9NRB3 414 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 KCNK4Q9NYG8 393 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 EMCNQ9ULC0 261 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 GIT1Q9Y2X7 761 aa14.95□□□□□ -0.02
TPM3-206ENST00000330188 FCHO1O14526 889 aa14.94□□□□□ -0.02
TPM3-206ENST00000330188 TPP1O14773 563 aa14.94□□□□□ -0.02
TPM3-206ENST00000330188 ZNF189O75820 626 aaPredicted RBP14.94□□□□□ -0.02
TPM3-206ENST00000330188 KRT72Q14CN4 511 aa14.94□□□□□ -0.02
TPM3-206ENST00000330188 ALYREFQ86V81 257 aaKnown RBP14.94□□□□□ -0.02
TPM3-206ENST00000330188 RASSF3Q86WH2 238 aa14.94□□□□□ -0.02
TPM3-206ENST00000330188 ARID3BQ8IVW6 561 aaPredicted RBP14.94□□□□□ -0.02
TPM3-206ENST00000330188 OR52K1Q8NGK4 314 aa14.94□□□□□ -0.02
TPM3-206ENST00000330188 SMARCD1Q96GM5 515 aa14.94□□□□□ -0.02
TPM3-206ENST00000330188 RTP3Q9BQQ7 232 aa14.94□□□□□ -0.02
TPM3-206ENST00000330188 MTG1Q9BT17 334 aaPredicted RBP14.94□□□□□ -0.02
TPM3-206ENST00000330188 RRN3Q9NYV6 651 aa14.94□□□□□ -0.02
TPM3-206ENST00000330188 IL1RAPL1Q9NZN1 696 aa14.94□□□□□ -0.02
TPM3-206ENST00000330188 MANSC4A6NHS7 340 aaPredicted RBP14.93□□□□□ -0.02
TPM3-206ENST00000330188 NCAM2O15394 837 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 KPNA6O60684 536 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 CCDC22O60826 627 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 AP2A1O95782 977 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 ITGA2BP08514 1039 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 GM2AP17900 193 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 MGAT3Q09327 533 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 PDE1CQ14123 709 aaPredicted RBP14.93□□□□□ -0.02
TPM3-206ENST00000330188 DBN1Q16643 649 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 UPP1Q16831 310 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 ARL13BQ3SXY8 428 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 TIGD5Q53EQ6 642 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 GNASQ5JWF2 1037 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 SPANXN3Q5MJ09 141 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 C16orf46Q6P387 395 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 CES3Q6UWW8 571 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 CXCL17Q6UXB2 119 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 RSPH3Q86UC2 560 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 EDEM1Q92611 657 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 MYLPFQ96A32 169 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 FCRL3Q96P31 734 aaPredicted RBP14.93□□□□□ -0.02
TPM3-206ENST00000330188 COLEC11Q9BWP8 271 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 NMUR2Q9GZQ4 415 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 CSNK1G1Q9HCP0 422 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 C15orf41Q9Y2V0 281 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 SNX10Q9Y5X0 201 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 SHROOM3Q8TF72 1996 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 ZBTB24O43167 697 aaPredicted RBP14.93□□□□□ -0.02
TPM3-206ENST00000330188 PEX11AO75192 247 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 GLRA3O75311 464 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 F9P00740 461 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 POLBP06746 335 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 ERVK-10P10266 1014 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 PCSK1P29120 753 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 RPL9P32969 192 aaKnown RBP14.93□□□□□ -0.02
TPM3-206ENST00000330188 IRX4P78413 519 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 CDK18Q07002 472 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 SMAD1Q15797 465 aaKnown RBP14.93□□□□□ -0.02
TPM3-206ENST00000330188 INTS6LQ5JSJ4 861 aaKnown RBP14.93□□□□□ -0.02
TPM3-206ENST00000330188 N4BP2L1Q5TBK1 243 aaPredicted RBP14.93□□□□□ -0.02
TPM3-206ENST00000330188 ZCCHC23Q6ZST2 131 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 CRLF3Q8IUI8 442 aa14.93□□□□□ -0.02
TPM3-206ENST00000330188 HDAC11Q96DB2 347 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms