RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 PRPSAP2O60256 369 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 ZBED1O96006 694 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 IRF1P10914 325 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 LCP1P13796 627 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 HOXC13P31276 330 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 MATKP42679 507 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 TUBP50607 506 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 VSNL1P62760 191 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 SLC25A11Q02978 314 aaKnown RBP17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 CCNG2Q16589 344 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 GAB4Q2WGN9 574 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 ITPRIPL2Q3MIP1 535 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 DRICH1Q6PGQ1 229 aaPredicted RBP17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 KLHL7Q8IXQ5 586 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 ADGRG2Q8IZP9 1017 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 DTWD2Q8NBA8 298 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 SEC14L1Q92503 715 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 MAGOHBQ96A72 148 aaKnown RBP17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 P2RY11Q96G91 374 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 PKNOX2Q96KN3 472 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 ECT2Q9H8V3 914 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 FAM114A2Q9NRY5 505 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 STAP1Q9ULZ2 295 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 USP18Q9UMW8 372 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 MYO16Q9Y6X6 1858 aa17.01■□□□□ 0.31
PDLIM1-201ENST00000329399 HELZP42694 1942 aaKnown RBP17■□□□□ 0.31
PDLIM1-201ENST00000329399 BHMG1C9JSJ3 638 aaPredicted RBP17■□□□□ 0.31
PDLIM1-201ENST00000329399 DAB1O75553 588 aa17■□□□□ 0.31
PDLIM1-201ENST00000329399 HEXIM1O94992 359 aaKnown RBP17■□□□□ 0.31
PDLIM1-201ENST00000329399 GJB6O95452 261 aa17■□□□□ 0.31
PDLIM1-201ENST00000329399 TRUB2O95900 331 aaKnown RBP17■□□□□ 0.31
PDLIM1-201ENST00000329399 KRT1P04264 644 aa17■□□□□ 0.31
PDLIM1-201ENST00000329399 NOS2P35228 1153 aa17■□□□□ 0.31
PDLIM1-201ENST00000329399 AIF1P55008 147 aa17■□□□□ 0.31
PDLIM1-201ENST00000329399 YWHAZP63104 245 aaKnown RBP17■□□□□ 0.31
PDLIM1-201ENST00000329399 DR1Q01658 176 aa17■□□□□ 0.31
PDLIM1-201ENST00000329399 MESP2Q0VG99 397 aa17■□□□□ 0.31
PDLIM1-201ENST00000329399 KLF1Q13351 362 aaPredicted RBP17■□□□□ 0.31
PDLIM1-201ENST00000329399 NNTQ13423 1086 aa17■□□□□ 0.31
PDLIM1-201ENST00000329399 GAS6Q14393 721 aa17■□□□□ 0.31
PDLIM1-201ENST00000329399 PON2Q15165 354 aa17■□□□□ 0.31
PDLIM1-201ENST00000329399 TAZQ16635 292 aa17■□□□□ 0.31
PDLIM1-201ENST00000329399 C10orf120Q5SQS8 335 aa17■□□□□ 0.31
PDLIM1-201ENST00000329399 ZFYVE27Q5T4F4 411 aa17■□□□□ 0.31
PDLIM1-201ENST00000329399 EMBQ6PCB8 327 aa17■□□□□ 0.31
PDLIM1-201ENST00000329399 PRELID2Q8N945 189 aa17■□□□□ 0.31
PDLIM1-201ENST00000329399 CLDN23Q96B33 292 aa17■□□□□ 0.31
PDLIM1-201ENST00000329399 PIEZO1Q92508 2521 aa17■□□□□ 0.31
PDLIM1-201ENST00000329399 H0Y858 1186 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 NDC80O14777 642 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 RAD51CO43502 376 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 GALR2O43603 387 aaPredicted RBP16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 CHRNB1P11230 501 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 MIPP30301 263 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 GJA4P35212 333 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 ATP5C1P36542 298 aaKnown RBP16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 YWHAGP61981 247 aaKnown RBP eCLIP16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 SLC25A52Q3SY17 297 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 CCDC14Q49A88 953 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 RHBDF2Q6PJF5 856 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 SPOCD1Q6ZMY3 1216 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 HDXQ7Z353 690 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 BBS7Q8IWZ6 715 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 MAML2Q8IZL2 1156 aaPredicted RBP16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 EMC1Q8N766 993 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 EDEM1Q92611 657 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 EZH1Q92800 747 aaPredicted RBP16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 PHOX2BQ99453 314 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 DDX47Q9H0S4 455 aaKnown RBP16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 LMAN1LQ9HAT1 526 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 POPDC2Q9HBU9 364 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 C2orf42Q9NWW7 574 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 DMGDHQ9UI17 866 aaKnown RBP16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 HCN4Q9Y3Q4 1203 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 ENDOD1O94919 500 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 KLKB1P03952 638 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 RARAP10276 462 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 FLT3P36888 993 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 COILP38432 576 aaPredicted RBP16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 IFNAR2P48551 515 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 GALK1P51570 392 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 MLLT6P55198 1093 aaPredicted RBP16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 DAOAP59103 153 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 PDGFRLQ15198 375 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 SIX1Q15475 284 aaPredicted RBP16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 BEND6Q5SZJ8 279 aaPredicted RBP16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 BSPRYQ5W0U4 402 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 CCDC137Q6PK04 289 aaKnown RBP16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 RALGPS2Q86X27 583 aaPredicted RBP16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 CPNE8Q86YQ8 564 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 MIB1Q86YT6 1006 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 SFTPA1Q8IWL2 248 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 ATL2Q8NHH9 583 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 CCHCR1Q8TD31 782 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 NT5C3BQ969T7 300 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 SLC2A13Q96QE2 648 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 EPC1Q9H2F5 836 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 ACBD3Q9H3P7 528 aa16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 C8orf33Q9H7E9 229 aaPredicted RBP16.99■□□□□ 0.31
PDLIM1-201ENST00000329399 CLIC5Q9NZA1 410 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms