RNA–Protein interactions for RNA: ENST00000327367.8

SMAD3-201, Transcript of SMAD family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD3, Length 6,247 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-201ENST00000327367 VTI1BQ9UEU0 232 aa16.78■□□□□ 0.28
SMAD3-201ENST00000327367 ZNF221Q9UK13 617 aa16.78■□□□□ 0.28
SMAD3-201ENST00000327367 TRIM3O75382 744 aaPredicted RBP16.77■□□□□ 0.28
SMAD3-201ENST00000327367 SCGNO76038 276 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 PTGS2P35354 604 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 CKAP2Q8WWK9 683 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 PROX1Q92786 737 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 MRPL48Q96GC5 212 aaKnown RBP16.77■□□□□ 0.28
SMAD3-201ENST00000327367 AATKQ6ZMQ8 1374 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 PALLDQ8WX93 1383 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 CYP2F1P24903 491 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 GRTP1Q5TC63 336 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 PMF1Q6P1K2 205 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 TMC7Q7Z402 723 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 SLFN11Q7Z7L1 901 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 NLGN1Q8N2Q7 840 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 ACTL9Q8TC94 416 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 CCDC28BQ9BUN5 200 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 SLITRK2Q9H156 845 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 SLC35C2Q9NQQ7 365 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 ADPRHL2Q9NX46 363 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 MTSS1O43312 755 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 PIGNO95427 931 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 PRLP01236 227 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 COX4I1P13073 169 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 MTMR2Q13614 643 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 NEDD1Q8NHV4 660 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 B3GALT6Q96L58 329 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 ABCB9Q9NP78 766 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 ING3Q9NXR8 418 aa16.77■□□□□ 0.28
SMAD3-201ENST00000327367 CES2O00748 559 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 ATP6V1G1O75348 118 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 ALDH1A1P00352 501 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 VIL1P09327 827 aaKnown RBP16.77■□□□□ 0.27
SMAD3-201ENST00000327367 DRD4P21917 467 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 KPNA1P52294 538 aaPredicted RBP16.77■□□□□ 0.27
SMAD3-201ENST00000327367 BAATQ14032 418 aaPredicted RBP16.77■□□□□ 0.27
SMAD3-201ENST00000327367 XKR3Q5GH77 459 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 SPESP1Q6UW49 350 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 DSG4Q86SJ6 1040 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 RTKN2Q8IZC4 609 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 OR6J1Q8NGC5 347 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 PRKAG3Q9UGI9 489 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 SIK3Q9Y2K2 1263 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 GSTK1Q9Y2Q3 226 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 STARD13Q9Y3M8 1113 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 C2orf71A6NGG8 1288 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 KIAA0391O15091 583 aaKnown RBP16.77■□□□□ 0.27
SMAD3-201ENST00000327367 KPNA5O15131 536 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 SLC20A2Q08357 652 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 PAGE2BQ5JRK9 111 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 TTI2Q6NXR4 508 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 FAM131AQ6UXB0 335 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 REEP1Q9H902 201 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 ABI2Q9NYB9 513 aaPredicted RBP16.77■□□□□ 0.27
SMAD3-201ENST00000327367 IKZF3Q9UKT9 509 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 DNPEPQ9ULA0 475 aa16.77■□□□□ 0.27
SMAD3-201ENST00000327367 LOC110117498-PIK3R3F6TDL0 507 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 HPGDP15428 266 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 TSPAN8P19075 237 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 POLD2P49005 469 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 ZNF543Q08ER8 600 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 CIAPIN1Q6FI81 312 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 MBOAT7Q96N66 472 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 RPRD1AQ96P16 312 aaPredicted RBP16.76■□□□□ 0.27
SMAD3-201ENST00000327367 CBWD1Q9BRT8 395 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 DPP3Q9NY33 737 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 LSM7Q9UK45 103 aaKnown RBP16.76■□□□□ 0.27
SMAD3-201ENST00000327367 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.76■□□□□ 0.27
SMAD3-201ENST00000327367 USP12O75317 370 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 FADS2O95864 444 aaKnown RBP16.76■□□□□ 0.27
SMAD3-201ENST00000327367 PTPAQ15257 358 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 C6orf52Q5T4I8 152 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 BORCS5Q969J3 196 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 TIPINQ9BVW5 301 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 GSDMCQ9BYG8 508 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 CLPBQ9H078 707 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 CLASP1Q7Z460 1538 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 PROSCO94903 275 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 ALADP13716 330 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 ARF4P18085 180 aaPredicted RBP16.76■□□□□ 0.27
SMAD3-201ENST00000327367 SCRN3Q0VDG4 424 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 CREG2Q8IUH2 290 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 AMER2Q8N7J2 671 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 PHF12Q96QT6 1004 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 SEMA4BQ9NPR2 832 aaPredicted RBP16.76■□□□□ 0.27
SMAD3-201ENST00000327367 DYRK1BQ9Y463 629 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 UBE2QL1A1L167 161 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 CCDC162PA2VCL2 907 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 ERVK-10P10266 1014 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 NEK3P51956 506 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 HSF2Q03933 536 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 ZNF613Q6PF04 617 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 MILR1Q7Z6M3 343 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 TMEM132CQ8N3T6 1108 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 C17orf50Q8WW18 174 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 ATXN3LQ9H3M9 355 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 KCNK4Q9NYG8 393 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 MED24O75448 989 aa16.76■□□□□ 0.27
SMAD3-201ENST00000327367 RCVRNP35243 200 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms