RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 FAM187AA6NFU0 413 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 FAM72CH0Y354 149 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 APOL1O14791 398 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 PAGE1O75459 146 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 EPCAMP16422 314 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 PFKLP17858 780 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 HOXC13P31276 330 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 DR1Q01658 176 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 NOMO1Q15155 1222 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 OASLQ15646 514 aaKnown RBP13.15□□□□□ -0.3
DDX39A-202ENST00000324340 RNF187Q5TA31 235 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-202ENST00000324340 FAM72AQ5TYM5 149 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 MANEALQ5VSG8 457 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 FAM72DQ6L9T8 149 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 EP400NLQ6ZTU2 488 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 GAREM2Q75VX8 874 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 FAM72BQ86X60 149 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 MIB1Q86YT6 1006 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 ATL2Q8NHH9 583 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 ACTL9Q8TC94 416 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.15□□□□□ -0.3
DDX39A-202ENST00000324340 ARNTL2Q8WYA1 636 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 SEC14L1Q92503 715 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 EPAS1Q99814 870 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 CERS4Q9HA82 394 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 EBF2Q9HAK2 575 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 ARHGEF4Q9NR80 690 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 ZDHHC7Q9NXF8 308 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 DMGDHQ9UI17 866 aaKnown RBP13.15□□□□□ -0.3
DDX39A-202ENST00000324340 NEU3Q9UQ49 428 aa13.15□□□□□ -0.3
DDX39A-202ENST00000324340 SLC12A8A0AV02 714 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 GMNCA6NCL1 334 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 EPOPA6NHQ4 379 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 EEF2KO00418 725 aaKnown RBP13.14□□□□□ -0.31
DDX39A-202ENST00000324340 DCLK1O15075 740 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 TTI1O43156 1089 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 CREB3O43889 395 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 LRIG2O94898 1065 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 CSPG5O95196 566 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 FGF19O95750 216 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 APOEP02649 317 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 ITGAVP06756 1048 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 PECAM1P16284 738 aaPredicted RBP13.14□□□□□ -0.31
DDX39A-202ENST00000324340 CDC25CP30307 473 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 NR2C2P49116 596 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 VCPP55072 806 aaKnown RBP13.14□□□□□ -0.31
DDX39A-202ENST00000324340 MLLT6P55198 1093 aaPredicted RBP13.14□□□□□ -0.31
DDX39A-202ENST00000324340 DYNLT1P63172 113 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 COG7P83436 770 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 OTUD4Q01804 1114 aaKnown RBP13.14□□□□□ -0.31
DDX39A-202ENST00000324340 BYSLQ13895 437 aaKnown RBP13.14□□□□□ -0.31
DDX39A-202ENST00000324340 KCNC3Q14003 757 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 PAFAH1B3Q15102 231 aaKnown RBP13.14□□□□□ -0.31
DDX39A-202ENST00000324340 DUSP6Q16828 381 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 CCDC38Q502W7 563 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 AGBL2Q5U5Z8 902 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 AP1ARQ63HQ0 302 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 NUGGCQ68CJ6 796 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 NCBP2-AS2Q69YL0 99 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 SYDE1Q6ZW31 735 aaPredicted RBP13.14□□□□□ -0.31
DDX39A-202ENST00000324340 ADGRD2Q7Z7M1 963 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 CCDC105Q8IYK2 499 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 LEMD2Q8NC56 503 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 GRK7Q8WTQ7 553 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 AZIN2Q96A70 460 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 ARL8AQ96BM9 186 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 PLD4Q96BZ4 506 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 BTN2A3PQ96KV6 586 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 RNF38Q9H0F5 515 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 DNPEPQ9ULA0 475 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 NEU2Q9Y3R4 380 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 HCFC2Q9Y5Z7 792 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 HS3ST4Q9Y661 456 aa13.14□□□□□ -0.31
DDX39A-202ENST00000324340 C2orf78A6NCI8 922 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 GOLGA6L10A6NI86 522 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 SOBPA7XYQ1 873 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 CCL16O15467 120 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 HEXIM1O94992 359 aaKnown RBP13.13□□□□□ -0.31
DDX39A-202ENST00000324340 PTPN2P17706 415 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 AMPD1P23109 780 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 GABRR2P28476 465 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 GBP2P32456 591 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-202ENST00000324340 KCNJ1P48048 391 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 TPI1P60174 286 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 SLC7A5Q01650 507 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 SNX1Q13596 522 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 SPDYCQ5MJ68 293 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 PIK3R6Q5UE93 754 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 ELMSAN1Q6PJG2 1045 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 JAMLQ86YT9 394 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 UNC45BQ8IWX7 931 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 ZNF683Q8IZ20 524 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 HS6ST3Q8IZP7 471 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 ATP6V0D2Q8N8Y2 350 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 GDPD5Q8WTR4 605 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 CENPTQ96BT3 561 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 TIFAQ96CG3 184 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 ZIM3Q96PE6 472 aa13.13□□□□□ -0.31
DDX39A-202ENST00000324340 CDCA3Q99618 268 aaPredicted RBP13.13□□□□□ -0.31
DDX39A-202ENST00000324340 KLF16Q9BXK1 252 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms