RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 ZMYND8Q9ULU4 1186 aaPredicted RBP27.12■■□□□ 1.93
TM6SF1-202ENST00000322019 A0A087WUV0 522 aaPredicted RBP27.12■■□□□ 1.93
TM6SF1-202ENST00000322019 E7EVH7 732 aa27.12■■□□□ 1.93
TM6SF1-202ENST00000322019 TLR5O60602 858 aa27.12■■□□□ 1.93
TM6SF1-202ENST00000322019 PSMB4P28070 264 aa27.12■■□□□ 1.93
TM6SF1-202ENST00000322019 GARSP41250 739 aaKnown RBP27.12■■□□□ 1.93
TM6SF1-202ENST00000322019 GALNT2Q10471 571 aa27.12■■□□□ 1.93
TM6SF1-202ENST00000322019 PDZD4Q76G19 769 aaPredicted RBP27.12■■□□□ 1.93
TM6SF1-202ENST00000322019 ZNF534Q76KX8 674 aa27.12■■□□□ 1.93
TM6SF1-202ENST00000322019 ZNF461Q8TAF7 563 aa27.12■■□□□ 1.93
TM6SF1-202ENST00000322019 TRIM56Q9BRZ2 755 aaKnown RBP27.12■■□□□ 1.93
TM6SF1-202ENST00000322019 CHD7Q9P2D1 2997 aa27.12■■□□□ 1.93
TM6SF1-202ENST00000322019 EXOC1LA0A1B0GW35 172 aa27.11■■□□□ 1.93
TM6SF1-202ENST00000322019 SLC12A8A0AV02 714 aa27.11■■□□□ 1.93
TM6SF1-202ENST00000322019 DFFAO00273 331 aa27.11■■□□□ 1.93
TM6SF1-202ENST00000322019 CSPG5O95196 566 aa27.11■■□□□ 1.93
TM6SF1-202ENST00000322019 ABHD2P08910 425 aa27.11■■□□□ 1.93
TM6SF1-202ENST00000322019 LAG3P18627 525 aa27.11■■□□□ 1.93
TM6SF1-202ENST00000322019 GCAP28676 217 aa27.11■■□□□ 1.93
TM6SF1-202ENST00000322019 PPIDQ08752 370 aaKnown RBP27.11■■□□□ 1.93
TM6SF1-202ENST00000322019 TBC1D31Q96DN5 1066 aa27.11■■□□□ 1.93
TM6SF1-202ENST00000322019 CAPS2Q9BXY5 557 aa27.11■■□□□ 1.93
TM6SF1-202ENST00000322019 AFF4Q9UHB7 1163 aaKnown RBP27.11■■□□□ 1.93
TM6SF1-202ENST00000322019 SHROOM3Q8TF72 1996 aa27.11■■□□□ 1.93
TM6SF1-202ENST00000322019 POC1B-GALNT4F8VUJ3 575 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 SMAPO00193 183 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 PTPN3P26045 913 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 MAGEA6P43360 314 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 ZBTB17Q13105 803 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 C3orf62Q6ZUJ4 267 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 RABEP2Q9H5N1 569 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 IL23AQ9NPF7 189 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 CXXC1Q9P0U4 656 aaPredicted RBP27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 CDH23Q9H251 3354 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 ABLIM3O94929 683 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 ZDHHC11BP0C7U3 371 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 SERPINB6P35237 376 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 MLLT6P55198 1093 aaPredicted RBP27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 PPP2R2AP63151 447 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 GNGT1P63211 74 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 SKOR1P84550 965 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 OLIG2Q13516 323 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 SEMA5AQ13591 1074 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 ZSCAN26Q16670 478 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 MS4A13Q5J8X5 152 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 PID1Q7Z2X4 250 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 PDCD7Q8N8D1 485 aaKnown RBP27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 MDM1Q8TC05 714 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 ZNF512Q96ME7 567 aaPredicted RBP27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 AGAP3Q96P47 875 aa27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 KLHL8Q9P2G9 620 aaPredicted RBP27.1■■□□□ 1.93
TM6SF1-202ENST00000322019 STK10O94804 968 aaKnown RBP27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 SPATA31D3P0C874 917 aa27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 CREB1P16220 341 aa27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 CA8P35219 290 aa27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 TUFMP49411 452 aaKnown RBP27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 ZNF135P52742 658 aaPredicted RBP27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 SPATA31D4Q6ZUB0 917 aa27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 TFAP2DQ7Z6R9 452 aa27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 ARHGAP12Q8IWW6 846 aa27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 PALM2Q8IXS6 379 aa27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 BADQ92934 168 aa27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 HDAC11Q96DB2 347 aa27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 HERC2P3Q9BVR0 1158 aa27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 TEX264Q9Y6I9 313 aa27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 RANBP2P49792 3224 aaKnown RBP27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 OPHN1O60890 802 aa27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 URODP06132 367 aa27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 HOXC13P31276 330 aa27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 STAT4Q14765 748 aa27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 TNFAIP8L3Q5GJ75 292 aa27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 MPP5Q8N3R9 675 aa27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 ATP11CQ8NB49 1132 aa27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 TTLL2Q9BWV7 592 aa27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 YIPF1Q9Y548 306 aa27.09■■□□□ 1.93
TM6SF1-202ENST00000322019 EIF3HO15372 352 aaKnown RBP eCLIP27.08■■□□□ 1.93
TM6SF1-202ENST00000322019 SHOX2O60902 331 aaPredicted RBP27.08■■□□□ 1.93
TM6SF1-202ENST00000322019 AGTP01019 485 aa27.08■■□□□ 1.93
TM6SF1-202ENST00000322019 APOEP02649 317 aa27.08■■□□□ 1.93
TM6SF1-202ENST00000322019 HMGA1P17096 107 aaKnown RBP27.08■■□□□ 1.93
TM6SF1-202ENST00000322019 PSEN1P49768 467 aa27.08■■□□□ 1.93
TM6SF1-202ENST00000322019 SPARCL1Q14515 664 aa27.08■■□□□ 1.93
TM6SF1-202ENST00000322019 TRIP4Q15650 581 aaPredicted RBP27.08■■□□□ 1.93
TM6SF1-202ENST00000322019 LRRC31Q6UY01 552 aa27.08■■□□□ 1.93
TM6SF1-202ENST00000322019 DDX53Q86TM3 631 aaKnown RBP27.08■■□□□ 1.93
TM6SF1-202ENST00000322019 FBF1Q8TES7 1133 aa27.08■■□□□ 1.93
TM6SF1-202ENST00000322019 CFAP36Q96G28 342 aa27.08■■□□□ 1.93
TM6SF1-202ENST00000322019 GORASP1Q9BQQ3 440 aa27.08■■□□□ 1.93
TM6SF1-202ENST00000322019 PHACTR1Q9C0D0 580 aa27.08■■□□□ 1.93
TM6SF1-202ENST00000322019 SLC12A6Q9UHW9 1150 aa27.08■■□□□ 1.93
TM6SF1-202ENST00000322019 ZBTB24O43167 697 aaPredicted RBP27.07■■□□□ 1.92
TM6SF1-202ENST00000322019 EFCAB14O75071 495 aa27.07■■□□□ 1.92
TM6SF1-202ENST00000322019 MX2P20592 715 aa27.07■■□□□ 1.92
TM6SF1-202ENST00000322019 NUMBP49757 651 aa27.07■■□□□ 1.92
TM6SF1-202ENST00000322019 KCNQ1P51787 676 aa27.07■■□□□ 1.92
TM6SF1-202ENST00000322019 RAP1GAP2Q684P5 730 aa27.07■■□□□ 1.92
TM6SF1-202ENST00000322019 C4orf22Q6V702 233 aa27.07■■□□□ 1.92
TM6SF1-202ENST00000322019 USP33Q8TEY7 942 aa27.07■■□□□ 1.92
TM6SF1-202ENST00000322019 MYEOVQ96EZ4 313 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms