RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 UBP1Q9NZI7 540 aa13.05□□□□□ -0.32
DNMT3A-202ENST00000321117 BCLAF3A2AJT9 711 aaKnown RBP13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 CXorf49A8MYA2 514 aaPredicted RBP13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 PLIN3O60664 434 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 GM2AP17900 193 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 AQP4P55087 323 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 FAM83EQ2M2I3 478 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 HABP4Q5JVS0 413 aaKnown RBP13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 LINC00523Q86TU6 105 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 CYP4F12Q9HCS2 524 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 CHST12Q9NRB3 414 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 SNX15Q9NRS6 342 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 LZTS1Q9Y250 596 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 PTPRJQ12913 1337 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 HDAC3O15379 428 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 B4GALT5O43286 388 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 VTNP04004 478 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 TPH1P17752 444 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 TPSB2P20231 275 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 TMEM62Q0P6H9 643 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 DCTN2Q13561 401 aaKnown RBP13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 TPSAB1Q15661 275 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 NRF1Q16656 503 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 PLEKHG4Q58EX7 1191 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 TREML1Q86YW5 311 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 IGDCC3Q8IVU1 814 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 RNF139Q8WU17 664 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 PRR11Q96HE9 360 aaPredicted RBP13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 LGMNQ99538 433 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 UNKQ9C0B0 810 aaKnown RBP13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 COG4Q9H9E3 785 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 PRPF19Q9UMS4 504 aaKnown RBP13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 HEATR9A2RTY3 570 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 GOLGA8TH3BQL2 631 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 B4GALT4O60513 344 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 JCHAINP01591 159 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 SLC4A1P02730 911 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 HSPA1AP0DMV8 641 aaKnown RBP13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 HSPA1BP0DMV9 641 aaKnown RBP13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 MAP4P27816 1152 aaKnown RBP13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 RAB27AP51159 221 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 CMPK2Q5EBM0 449 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 TWF2Q6IBS0 349 aaKnown RBP13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 METTL23Q86XA0 190 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 OR52K1Q8NGK4 314 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 URGCPQ8TCY9 931 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 ZFAND2BQ8WV99 257 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 OTUD5Q96G74 571 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 RMND5BQ96G75 393 aaPredicted RBP13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 FAR2Q96K12 515 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 COPG2Q9UBF2 871 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 MORF4L1Q9UBU8 362 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 POMPQ9Y244 141 aa13.04□□□□□ -0.32
DNMT3A-202ENST00000321117 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 DCAF8L1A6NGE4 600 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 SLC15A5A6NIM6 579 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 PFDN6O15212 129 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 GSTA4O15217 222 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 CD4P01730 458 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 ACAT1P24752 427 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 EPHA3P29320 983 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 MSX2P35548 267 aaPredicted RBP13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 HADHAP40939 763 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 ADARP55265 1226 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 IL1RL1Q01638 556 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 SLC25A11Q02978 314 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 OCA2Q04671 838 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 ATPAF2Q8N5M1 289 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 C12orf29Q8N999 325 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 RCN3Q96D15 328 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 TSPAN17Q96FV3 270 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 DCUN1D1Q96GG9 259 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 MAGEB5Q9BZ81 275 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 ELOVL4Q9GZR5 314 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 DDIT4Q9NX09 232 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 PHGDHO43175 533 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 PIK3R1P27986 724 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 GMPSP49915 693 aaPredicted RBP13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 PRKAA2P54646 552 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 ANO4Q32M45 955 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 B3GNT9Q6UX72 402 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 RTKNQ9BST9 563 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 CDH19Q9H159 772 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 PAIP2BQ9ULR5 123 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 TNFSF13BQ9Y275 285 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 ZNF536O15090 1300 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 MAST2Q6P0Q8 1798 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 NCAM1P13591 858 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 IREB2P48200 963 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 SLC26A2P50443 739 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 NR1H2P55055 460 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 PEX6Q13608 980 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 SLC44A4Q53GD3 710 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 DEFB106AQ8N104 65 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 LZICQ8WZA0 190 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 SEMA6AQ9H2E6 1030 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 CPSF3Q9UKF6 684 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 ADAM28Q9UKQ2 775 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 ORC6Q9Y5N6 252 aa13.03□□□□□ -0.32
DNMT3A-202ENST00000321117 COL22A1Q8NFW1 1626 aaPredicted RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms